Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2890 ATGGATGTGATGGGTTATGAGCAATTTGATTACTCATTTAGCCCTATTCACATGAATCAGCTCCATGAATGTAGCTTAGAAGATGCATTTCCATTCCAAATAAATGATCTTTTATCATCTCCAAACACAACCAATGATGAAATGTTTGACCAAGAGTTTGTGGATGGATTGCTCAATCCACAACACTCAGACTCAGAGTACCTTGACTTTGATTCCATGAATCATGATGTCACAATGGAAATTGTGTCTGACTTATGTCATGAAGAAGTTGCTCCTATTATATCCGAAGAAAATGTGCAAAATTCCTCAATGGAATTAGGAGATGCATATTTGAAGGGTATTCAAGCAGAGCTAATGGAAGATACAAGTTTATCTGATCTACTGCTGACAGGTGCTGAAGCTGTTGAAGCACAGAATTGGTCCCTTGCATTGGACATAATACAGAAGCTTAACAATAATGCTTCATCATTATTCAATGAGGATTGTTTATTGAACAGGTTGGCTCTGTTTTTTGCTCAGGGTCTGTATCATAAGAGCATAAATAATGCTCCTGACATGATGCAGAGTGACCCTGTTTCTACACAGACAAATGCTTTCTGTGTGTTTCAGATACTTCAGGAACTTTCTCCTTATGTCAAATTTGCTCATTTCACTGCAAACCAAGCAATATTTGAGGCCACAGAAGGTTCTGAGGATGTTCATGTCATTGATTTCGACATCATGGAGGGGATCCAGTGGCCACCACTGATGGTGGATCTTGCAATGAGGAAGAACACCTCCCTTAGAGTAACAGCCATAGTTTCAGACCATCAGAGTGCATCTTGTGTTCAACAAACAGGAAGAAGACTCAAGGAGTTTGCAGATTCCATCAGTTTCCCATTCACTTTTGATCAGATGATGATGGTGGGTGAAGAAGATTTTCAAAGGGTTGGAGTTGGTCAAACACTTATAGTCAACTGTATGATACACCAATGGATGCCAAACAGGAGCTTCTCATTGGTCAAAACTTTCCTTGATGGTGTAACCAAGTTATCACCTAGGCTTGTAGTCTTAGTTGAAGAAGAATTGTTTAACTTTTCTAGGCTTAAATCAATGTCCTTTGTGGAGTTTTTCTGTGAGGCTCTGCATCACTACACAGCACTTTCTGATTCACTTGCTAGTAGTTGGTGTGGTGGACACAAGATGGAGTTGACCCTGATAGAGAAAGAGGTTTTGGGGCTACGGATTCTAGATAGTGTGAAGCAGTTTCCTTGTGAGAGGGAAGAGAGGATGTTGTGGGAAGAAGGGTTTTATTCCTTGAAGGGGTTTAAAAGGGTTCCTATGAGTAGCTGTAATATTTCACAGGCTAAGTTTTTGGTGAGCCTGTTTGGAGGAGGTTATTGGGTGCAATTTGAGAAGGGTAGGTTATCTTTGTGTTGGAAGTCAAGGCCTTTGACATCGGCTTCAATTTGGGTACCAAAAACTTATCTGAGTAATAAGATCAGATAG 1488 0.4019 MDVMGYEQFDYSFSPIHMNQLHECSLEDAFPFQINDLLSSPNTTNDEMFDQEFVDGLLNPQHSDSEYLDFDSMNHDVTMEIVSDLCHEEVAPIISEENVQNSSMELGDAYLKGIQAELMEDTSLSDLLLTGAEAVEAQNWSLALDIIQKLNNNASSLFNEDCLLNRLALFFAQGLYHKSINNAPDMMQSDPVSTQTNAFCVFQILQELSPYVKFAHFTANQAIFEATEGSEDVHVIDFDIMEGIQWPPLMVDLAMRKNTSLRVTAIVSDHQSASCVQQTGRRLKEFADSISFPFTFDQMMMVGEEDFQRVGVGQTLIVNCMIHQWMPNRSFSLVKTFLDGVTKLSPRLVVLVEEELFNFSRLKSMSFVEFFCEALHHYTALSDSLASSWCGGHKMELTLIEKEVLGLRILDSVKQFPCEREERMLWEEGFYSLKGFKRVPMSSCNISQAKFLVSLFGGGYWVQFEKGRLSLCWKSRPLTSASIWVPKTYLSNKIR* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2890 495 ProSiteProfiles GRAS family profile. 115 485 IPR005202 -
Aev03g2890 495 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 5 486 IPR005202 -
Aev03g2890 495 Pfam GRAS domain family 125 484 IPR005202 -
Aev03g2890 495 PANTHER OS12G0162700 PROTEIN 5 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g2890 Aev-Chr3 28268180 28269667 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g2890 200 484 GRAS Transcription Factor Family AT1G55580 35.897 4.51e-45 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Aev03g2890 GRAS 2.6e-78 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g2890 - - gmx:100804613 709.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g2890 03 28268180 28269667 Aev03g2890 03 28268180 28269667 ECH