Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2878 ATGGCTGCATCACATGAAACTGAACTCCCAGTGAAGGCTTTTGGCTGGGCTGCAAACGATACCTCTGGCATCCTCTCTCCATTTCATTTCTCCAGAAGGGAAAATGGGCCTGATGACGTCACACTGAAAATTCTGTACTGTGGGGTTTGCCATTCGGATCTGCATACCCTCAAGAATGATTGGGGTTTCACTACTTACCCTGTTGTTCCTGGGCATGAAATTGTTGGTGTTGTGACAAAAACTGGAAGTAATGTGAAAAAATTCAAAGAGGGTGATAAAGTTGGAGTTGGTGTGTTAGTGGATTCCTGTAAGGAATGTGATTATTGCCAGCAGGATCTGGAGAGTTACTGTCCTAAACCTGTATTTACCTATAACTCCCCATATCAAGGGTCAAGAACCCATGGTGGCTACTCCGATATTGTAGTTGTTCACCAGCGGTTTGTGCTCCGATTCCCTGAGAACTTACCCCTTGATGCTGGTGCTCCACTGCTGTGTGCTGGGATTACTGTGTATAGCCCAATGATGTATTATGGGATGACAGAACCAGGTAAACATTTGGGAGTTGCAGGGCTTGGTGGGTTAGGCCATGTTGCAATCAAGTTTGGTAAAGCATTTGGTCTCAAAGTTACTGCCATCAGTACCTCTCCCAGCAAGGAAGCCGAAGCCATTGACAAGCTTGGCGCTGATTCTTTCCTTGTTTCCTCTGACCCTGCCAAACTGAAGGCTGCTATGGGAACCATGGACTATATCATAGACACAATTTCTGCTGTGCATGCCCTGATGCCCCTTCTTGGTCTGCTGAAGATTAATGGGAAGCTGGTCACTGTTGGGTTGCCTAGCAAGCCGCTCGAACTGCCTATCTTTCCCTTAGTTGGAGGACGGAAACTTGTAGGAGGGAGCAACTTTGGAGGGCTAAAGGAGACTCAGGAGATGCTTGATTTCTGTGCAAAGCATAACATAACTGCGGATATTGAGCTGATCAAGATGGACCAAATCAACACCGCCATGGAAAGGCTTAGCAAAGCTGATGTCAAATATCGCTTTGTGATTGATGTTGCAAACTCCTTCTCCAGTAATCCGTAG 1083 0.4645 MAASHETELPVKAFGWAANDTSGILSPFHFSRRENGPDDVTLKILYCGVCHSDLHTLKNDWGFTTYPVVPGHEIVGVVTKTGSNVKKFKEGDKVGVGVLVDSCKECDYCQQDLESYCPKPVFTYNSPYQGSRTHGGYSDIVVVHQRFVLRFPENLPLDAGAPLLCAGITVYSPMMYYGMTEPGKHLGVAGLGGLGHVAIKFGKAFGLKVTAISTSPSKEAEAIDKLGADSFLVSSDPAKLKAAMGTMDYIIDTISAVHALMPLLGLLKINGKLVTVGLPSKPLELPIFPLVGGRKLVGGSNFGGLKETQEMLDFCAKHNITADIELIKMDQINTAMERLSKADVKYRFVIDVANSFSSNP* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2878 360 Pfam Zinc-binding dehydrogenase 193 316 IPR013149 -
Aev03g2878 360 Gene3D - 16 352 - -
Aev03g2878 360 SUPERFAMILY GroES-like 22 184 IPR011032 -
Aev03g2878 360 CDD CAD1 14 351 - -
Aev03g2878 360 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 2-RELATED 12 357 - -
Aev03g2878 360 PANTHER ALDEHYDE REDUCTASE 12 357 - -
Aev03g2878 360 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 155 320 IPR036291 -
Aev03g2878 360 SMART PKS_ER_names_mod 23 350 IPR020843 GO:0016491
Aev03g2878 360 Gene3D - 166 322 - -
Aev03g2878 360 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Aev03g2878 360 Pfam Alcohol dehydrogenase GroES-like domain 37 149 IPR013154 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g2878 Aev-Chr3 28206975 28210034 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g2878 12 356 Monolignol Biosynthesis Gene Families AT2G21730 72.126 0.0 520
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g2878 K00083 - gmx:100819684 640.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g2878 03 28206975 28210034 Aev03g2878 03 28206975 28210034 ECH