Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2872 ATGTACGTCGTTAAGAGGGATGGTCGCCAAGAGGCTGTGCATTTCGACAAGATAACCGCGCGCCTCAAGAAGCTCAGTTATGGCTTGAGCACTGACCACTGCGACCCTGTTCTTGTCGCTCAGAAGGTCTGTGCCGGTGTCTATAAGGGTGTCACCACTAGTCAACTCGATGAACTTGCTGCTGAAACTGCCGCTGCCATGACCGCCAACCACCCTGATTATGCTTCTTTGGCTGCTAGGATTGCTGTTTCCAATCTGCACAAGAACACCAAGAAGTCATTCTCAGAGACGGTGAAGCTCATGTACAACCATTTTAATGAGAGGTCTGGCTTGAAGGCTCCACTGATCGCTGAAGATGTCTATGAAATTATCATGAAGAATGCTGCTCGTTTGGATAGTGAGATAATCTATGATAGGGACTTTGACTATGATTACTTTGGTTTCAAAACCTTGGAGAGGTCCTATCTCCTGAAGGTTCAAGGGAAGGTTGTGGAAAGACCTCAACACATGTTGATGAGGGTTGCTGTTGGAATTCACAAGGATGATGTAGATTCTGCTGTCAAAACTTACCACATGATGTCACAGCGATGGTTCACTCATGCATCCCCAACTCTTTTTAATGCAGGAACACCTAGGCCTCAATTGAGTAGTTGCTTTCTTGTGTGCATGAAAGATGACAGCATAGAGGGAATATATGATACTTTGAAGGAGTGTGCTGTCATCAGTAAATCAGCAGGAGGAATTGGTGTTTCTGTTCACAACATTCGTGCCACGGGTAGTTACATTCGTGGAACCAATGGGACATCCAATGGAATTATTCCAATGTTGCGTGTGTTCAATGACACTGCCCGGTATGTTGACCAAGGGGGAGGCAAGAGGAAAGGTGCTTTTGCTGTGTACTTGGAGCCATGGCATGCTGATATATTTGAATTCCTGGATTTAAGGAAAAATCATGGAAAGGAAGAGCATCGTGCTCGGGATTTGTTTTATGCTCTTTGGGTTCCTGATCTCTTTATGGAAAGAGTTCAGAGTAATGGAGAATGGTCTTTGTTTTGTCCCAATGAGGCACCAGGTTTGGCAGACTGTTGGGGTGATGAGTTTGAGAACCTGTACAAGCAGTATGAAAGAGGAGGAAAAGCAAAGAAGGTTGTTCTGGCGCAGAATCTCTGGTTTGAAATTTTGAAGTCTCAGATAGAAACTGGAACTCCTTATATGCTTTTCAAGGACACTTGCAATAGGAAAAGCAATCAGCAGAATCTGGGCACCATTAAGTCATCAAACCTGTGCACTGAGATAATTGAGTATACAAGTCCTACAGAAACAGCTGTATGCAACTTAGCATCAATTGCATTACCTCGTTATGTTCGAGAGAAGGGAGTGCCCATGGAGTCTCAACCGTCTAAGCTTGTTGGAAGCAAAGGCTCAAAAAATCGATACTTTGACTTTGACAAATTGGGAGAGGTTACTTCAGTGATTACAACAAACCTTAATAAAATAATTGATGTTAATTATTACCCAGTTGAAACTGCAAGAGCATCAAACATGAGGCACAGACCCATTGGTATTGGTGTTCAGGGTCTGGCTGATACCTTCATACTACTAGGCATGGCATTTGATTCACTAGAGGCTCAACAATTAAACAAGGAGATATTTGAGACCATATACTACCATGCTCTGAAAACTTCTTCTGAATTAGCTGCAACGGAAGGCCCTTATGAAACATATAATGGTAGTCCTATAAGCAAGGGAATTATTCAGCCAGACATGTGGGGGGTGACTCCCTCAAGCCGCTGGGACTGGGATGCACTTCGGCAGATGATATCAGAAAATGGCGTGAGGAATTCTCTTCTTATTGCTCCAATGCCAACTGCATCTACAAGCCAGATTCTTGGCAATAATGAGTGTTTTGAGCCATATACTTCTAATATCTACAGTCGCAGAGTTTTAAGTGGTGAATTTGTTGTGGTGAACAAGCATTTACTTCATGACTTGACTGAAATGGGAGTGTGGTGTCCTAATGTCAAGAACAAGATTATCTATGAGGGTGGTTCAGTTCAGAAAATTGCAGAAGTACCTGATGAACTGAAAGACATATACAAAACTGTTTGGGAGATCAAGCAAAAGACATTGGTTGATATGGCTGTTGATCGAGGATGTTATATAGATCAGAGTCAAAGCTTGAATATCCACATGGATCAGCCCAATTTTGGAAAGCTGACTTCATTGCATTTCTATGCATGGTCCAAGGGTCTGAAGACTGGGATGTATTATCTGAGATCACGAGCAGCAGCTGATGCTATCAAGTTCACTGTTGATACCACTGCCCTCAAAGAAACCCCTAAGGTGGAGGATGATGATGGTACTAAGATGGCACAGATGGTGGCGAATCAAAAAGGGTTGGATGAAGAAGATCAGAACAACAACAATTATGTGTTGTCTATGCCAATGATGTTTCCTGGTCTGAATAAGGAGGAGGAGATGTCTGCTATGGTTGAGGCTCTGACTCATGTTGTCTGTGGAGAGGTTCCTGCTGCTGATGGTGATGCAGATTTTAAGGTTCTGCATCAGAATTTAGAGAATAGTACTAGTGTTGCAAATGAAGGAGGTGGTCCTAATGTTCCTGCTGCTATGACAAGAAATATGGATTCTGCTTCTGCAACAATGTCTTCTTCATCTTTATCTTTTGGTGGCAACTCTGCTCTCAAGAGAAGCAGAGAAGATGATGCATTCTTTGTTGCTTCATCCCCTACTACTATCCCTGCATCATCACAAATAGCAGTACCTGCAGTGTACGAATACAGAACAGAGAACAGCGATTTGAGAAGTGAAGCAAAGAGAAAATACAGAGGAGTGAGACAGAGGCCATGGGGCAAATGGGCAGCAGAGATAAGAGATCCATTCAAAGCAGCAAGAGTGTGGTTAGGAACATTCGACACTGCAGAGGCTGCAGCAAGAGCTTACGATCAAGCCTCTCTTCGTTTCAGAGGCAACAAAGCAAAACTCAACTTCCCTGAAAACGTCAGGCTCGTGCAGCCTCAACAACCACAACCTCAACACTTCACAATTTCATCACATTCTTCTTCTGCCATCACTACTGACCCTATGCCACACAATTTGCACAGTTCAAGCAATTTGTATGACTTTTCTTCTTCGCAGTTTCCAGACTTTCCCATAAGCTTGTATGATGATGAGGTGATTGTGTCATCTGCTATGGCTTCTTCGTCGCCTTCTTCTTCTTCTTCTACGCTTGCTTCTTCTGTCAGTTCTCCGAGGGCACCTATGATTGGATCGGTGTATTCTACACAGATGCCGGCGTGGTCTTCTGGTTATAGCTCATCTCCTTCTGGATGA 3351 0.4351 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTDHCDPVLVAQKVCAGVYKGVTTSQLDELAAETAAAMTANHPDYASLAARIAVSNLHKNTKKSFSETVKLMYNHFNERSGLKAPLIAEDVYEIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDVDSAVKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYDTLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIIPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGEWSLFCPNEAPGLADCWGDEFENLYKQYERGGKAKKVVLAQNLWFEILKSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRYVREKGVPMESQPSKLVGSKGSKNRYFDFDKLGEVTSVITTNLNKIIDVNYYPVETARASNMRHRPIGIGVQGLADTFILLGMAFDSLEAQQLNKEIFETIYYHALKTSSELAATEGPYETYNGSPISKGIIQPDMWGVTPSSRWDWDALRQMISENGVRNSLLIAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGVWCPNVKNKIIYEGGSVQKIAEVPDELKDIYKTVWEIKQKTLVDMAVDRGCYIDQSQSLNIHMDQPNFGKLTSLHFYAWSKGLKTGMYYLRSRAAADAIKFTVDTTALKETPKVEDDDGTKMAQMVANQKGLDEEDQNNNNYVLSMPMMFPGLNKEEEMSAMVEALTHVVCGEVPAADGDADFKVLHQNLENSTSVANEGGGPNVPAAMTRNMDSASATMSSSSLSFGGNSALKRSREDDAFFVASSPTTIPASSQIAVPAVYEYRTENSDLRSEAKRKYRGVRQRPWGKWAAEIRDPFKAARVWLGTFDTAEAAARAYDQASLRFRGNKAKLNFPENVRLVQPQQPQPQHFTISSHSSSAITTDPMPHNLHSSSNLYDFSSSQFPDFPISLYDDEVIVSSAMASSSPSSSSSTLASSVSSPRAPMIGSVYSTQMPAWSSGYSSSPSG* 1117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2872 1116 PRINTS Ethylene responsive element binding protein signature 948 959 IPR001471 GO:0003700|GO:0006355
Aev03g2872 1116 PRINTS Ethylene responsive element binding protein signature 970 986 IPR001471 GO:0003700|GO:0006355
Aev03g2872 1116 ProSiteProfiles ATP-cone domain profile. 1 92 IPR005144 -
Aev03g2872 1116 Pfam AP2 domain 947 996 IPR001471 GO:0003700|GO:0006355
Aev03g2872 1116 CDD RNR_I 167 760 - -
Aev03g2872 1116 SMART rav1_2 947 1010 IPR001471 GO:0003700|GO:0006355
Aev03g2872 1116 TIGRFAM NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 145 761 IPR013346 -
Aev03g2872 1116 PANTHER RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE 1 801 - -
Aev03g2872 1116 SUPERFAMILY PFL-like glycyl radical enzymes 215 770 - -
Aev03g2872 1116 ProSitePatterns Ribonucleotide reductase large subunit signature. 600 622 IPR000788 GO:0006260
Aev03g2872 1116 Pfam Ribonucleotide reductase, all-alpha domain 142 212 IPR013509 GO:0004748|GO:0005524|GO:0006260
Aev03g2872 1116 SUPERFAMILY R1 subunit of ribonucleotide reductase, N-terminal domain 6 214 IPR008926 -
Aev03g2872 1116 SUPERFAMILY DNA-binding domain 947 1005 IPR016177 GO:0003677
Aev03g2872 1116 PRINTS Ribonucleotide reductase large chain signature 293 312 IPR000788 GO:0006260
Aev03g2872 1116 PRINTS Ribonucleotide reductase large chain signature 423 434 IPR000788 GO:0006260
Aev03g2872 1116 PRINTS Ribonucleotide reductase large chain signature 546 569 IPR000788 GO:0006260
Aev03g2872 1116 PRINTS Ribonucleotide reductase large chain signature 480 503 IPR000788 GO:0006260
Aev03g2872 1116 PRINTS Ribonucleotide reductase large chain signature 518 540 IPR000788 GO:0006260
Aev03g2872 1116 PRINTS Ribonucleotide reductase large chain signature 611 638 IPR000788 GO:0006260
Aev03g2872 1116 Pfam Ribonucleotide reductase, barrel domain 216 757 IPR000788 GO:0006260
Aev03g2872 1116 CDD AP2 947 1006 IPR001471 GO:0003700|GO:0006355
Aev03g2872 1116 Pfam ATP cone domain 1 89 IPR005144 -
Aev03g2872 1116 Gene3D AP2/ERF domain 946 1006 IPR036955 GO:0003700|GO:0006355
Aev03g2872 1116 MobiDBLite consensus disorder prediction 1014 1036 - -
Aev03g2872 1116 Gene3D - 74 768 - -
Aev03g2872 1116 ProSiteProfiles AP2/ERF domain profile. 947 1004 IPR001471 GO:0003700|GO:0006355
Aev03g2872 1116 PANTHER RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE LARGE CHAIN 1 801 IPR039718 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g2872 Aev-Chr3 28158645 28168234 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g2872 817 1032 AP2-EREBP Transcription Factor Family AT5G64750 44.783 3.21e-35 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aev03g2872 Ribonuc_red_lgC 3.9e-190 CL0339
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g2872 K10807 - gmx:548020 1497.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g2872 03 28158645 28168234 Aev03g2872 03 28158645 28168234 ECH