Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2846 ATGGCGCCGAAGCAGAGAGTTCCGCGGAAGGTTAGCAGAAACCCTGAATTGATAAGGGGTATCGGAAAGTACTCGAGGTCCAAGATGTACCACAAGAGGGGTCTCTGGGCCATCAAGGCCAAAAACGGCGGCGTTTTGCCCCGCCACGATCCCAAACCTAAGCCTCAACCCCCCGCCGAGAAACCACCCAAATTTTACCCTGCTGATGATGTCAAGAAGCCCCTTATCAACAAGCATAAGCCCAAACCCACCAAGCTCAGGGCTAGCATTACTCCAGGGACAGTGTTGATTCTTCTTGCTGGTAGATTCAAGGGAAAGAGGGTAGTGTTTCTGAAGCAGCTTCCTTCTGGATTGCTTCTTGTTACTGGCCCTTTTAAGATCAATGGAGTTCCTTTGAGGCGTGTGAATCAATCCTATGTCATTGGCACATCGACCAAAGTAGATGTCTCCGGTGTTAATGTTGATAAAATTGATGATAAGTATTTTGCAAAGGAAGCCGAGAAGAAGAAGAAGAAGGGGGAAGGGGAGTTCTTTGAGGCAGAGAAGGAGGAGAAGAAAGTGCTGCCCCAGGAGAAGAAAGATGACCAGAAAACTGTGGACTCTGCATTGATAAAAGCCATCGAGAGTGTTCCAGATTTGAAGGCATATCTTGGTGCTAGGTTTTCCCTCAAGTCTGGTGTGAAGCCTCATGAGCTAGTCTTCTAG 705 0.4809 MAPKQRVPRKVSRNPELIRGIGKYSRSKMYHKRGLWAIKAKNGGVLPRHDPKPKPQPPAEKPPKFYPADDVKKPLINKHKPKPTKLRASITPGTVLILLAGRFKGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIGTSTKVDVSGVNVDKIDDKYFAKEAEKKKKKGEGEFFEAEKEEKKVLPQEKKDDQKTVDSALIKAIESVPDLKAYLGARFSLKSGVKPHELVF* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2846 234 Pfam Ribosomal protein L6, N-terminal domain 3 61 IPR005568 GO:0003735|GO:0005840|GO:0006412
Aev03g2846 234 Pfam Ribosomal protein L6e 127 234 IPR000915 GO:0003735|GO:0005840|GO:0006412
Aev03g2846 234 MobiDBLite consensus disorder prediction 41 86 - -
Aev03g2846 234 SUPERFAMILY Translation proteins SH3-like domain 88 177 IPR008991 -
Aev03g2846 234 PANTHER 60S RIBOSOMAL PROTEIN L6 1 234 - -
Aev03g2846 234 Gene3D - 88 172 IPR014722 -
Aev03g2846 234 PANTHER 60S RIBOSOMAL PROTEIN L6 1 234 IPR000915 GO:0003735|GO:0005840|GO:0006412
Aev03g2846 234 Coils Coil 163 183 - -
Aev03g2846 234 CDD KOW_RPL6 82 234 IPR041997 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g2846 Aev-Chr3 27982838 27984313 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g2846 1 234 Cytoplasmic Ribosomal Protein Gene Family AT1G74050 82.479 4.01e-122 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g2846 K02934 - pvy:116113922 392.504