Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2837 ATGAATTCTCCTCCTTCTCAATTTGTTTCCTCAAGAAGGATTGGATTGTATGATCCAATCCACCAAATTTCAACTATGTGGGACGAAAATTTCACAAACAATGGGAATTTGAGTGCATCCACCTTCCTAATAGATGAAGCAGACATGAAATTAGATAATCAGTCAGAGGATGTTTCCCATGGAATGCCTGGAACATCTAAACAGTATGATCAAGAAGCTAATAGAATTACAGATAAGATACAAAGACGTCTTGCACAAAATCGAGAGGCTGCACGTAAGAGTAGGTTGCGGAAAAAGGCCTATGTACAGCAGTTAGAGTCATGTCGACTGAAGCTGATGCAGATAGAGCAAGAGCTTGGACATGCAAGACAACAGGGATTATATATTGGTGGTGCATTGGGTTCTAATAGTTTGGGTTTTGCTGGCTCTATGAATTCAGGAGTAACAACGTTTGAGATGGAGTATGGACATTGGCTAGAAGAGCAAAATAGACAAGTTTTGGAACTGAGAAGTGCTTTGAATTCTCATATTGCTGATACAGAGCTGGAGACACTTGTAGATAGAATAATGAACCACTATTTCAAACTCTATAACATGAAATCTTCCGCCGCAAGAGCAGATGCTTTCTATGTTATGTCCGGTATGTGGAAAACGACAGCTGAACGATTTTTCTTCTGGATCGGAGGCTTTCGCCCCTCTGAAATTCTAAAGGTTCTGGTCCATAGGATCGAACCAATGACAGAGCAGCAACGGTTTGATGTCAGTAACCTCGGAAAATCATGTCAGCAAGCAGAAGATGCCCTTTCACAAGGCATGGACAAACTACAGCAAATGGTATCAGAAGCTATTGCAGCAGGACAACTTGTCGAGGAAACTCACATTCCACAGATGTCTACTGCAATGGAGAGGTTGGAGGCTCTAGTGAGCTTTGTGAACCAGGCTGATCATCTTCGACAGGAAACGTTACAGCAAATGTCTCGAATACTTACGAAACGCCAAGCTGCGCGATGGCTCCTCGCTTTTGGCGAATATTTCCAACGCTTAAGAGCTTTGAGCTCACTTTGGGCAAATCGTCCTCCCAAACCACCTGCATAA 1095 0.4274 MNSPPSQFVSSRRIGLYDPIHQISTMWDENFTNNGNLSASTFLIDEADMKLDNQSEDVSHGMPGTSKQYDQEANRITDKIQRRLAQNREAARKSRLRKKAYVQQLESCRLKLMQIEQELGHARQQGLYIGGALGSNSLGFAGSMNSGVTTFEMEYGHWLEEQNRQVLELRSALNSHIADTELETLVDRIMNHYFKLYNMKSSAARADAFYVMSGMWKTTAERFFFWIGGFRPSEILKVLVHRIEPMTEQQRFDVSNLGKSCQQAEDALSQGMDKLQQMVSEAIAAGQLVEETHIPQMSTAMERLEALVSFVNQADHLRQETLQQMSRILTKRQAARWLLAFGEYFQRLRALSSLWANRPPKPPA* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2837 364 PANTHER TRANSCRIPTION FACTOR TGA9 1 362 - -
Aev03g2837 364 Pfam Seed dormancy control 167 240 IPR025422 GO:0006351|GO:0043565
Aev03g2837 364 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 77 119 IPR004827 GO:0003700|GO:0006355
Aev03g2837 364 SUPERFAMILY Leucine zipper domain 79 107 IPR046347 GO:0003700|GO:0006355
Aev03g2837 364 SMART brlzneu 75 135 IPR004827 GO:0003700|GO:0006355
Aev03g2837 364 Gene3D - 78 127 - -
Aev03g2837 364 PANTHER BZIP FAMILY TRANSCRIPTION FACTOR 1 362 - -
Aev03g2837 364 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 82 97 IPR004827 GO:0003700|GO:0006355
Aev03g2837 364 ProSiteProfiles DOG1 domain profile. 148 358 IPR025422 GO:0006351|GO:0043565
Aev03g2837 364 Coils Coil 98 125 - -
Aev03g2837 364 Pfam bZIP transcription factor 78 107 IPR004827 GO:0003700|GO:0006355
Aev03g2837 364 Coils Coil 159 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g2837 Aev-Chr3 27933555 27936513 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g2837 1 362 Calmodulin-binding Proteins AT5G65210 63.859 5.38e-173 484
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aev03g2837 DOG1 2.2e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g2837 K14431 - gmx:100793353 547.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g2837 03 27933555 27936513 Aev03g2837 03 27933555 27936513 ECH