Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2833 ATGGTCCTGTTGGTATATTTCCTAATAGAGCTAGTCCTCATTGTTCAGTACCTCAGATCAGAAACACAGCGCACAATTACCACAAAACAGTACCTGAATTTCATCGAAGAGAAGAACCCCACAATCTGCTACACAAAAAGAAGGAGGGTTCTGCAGCAAGTAGAGGAGGCAGAGCATGAGGGTGAGGATGAAGCAGAGGAATGCAGAGTGTGCTTGTCAGAATTGGAGGAAGGGGACAAACTGAGGAACCTCAAGTGCAAGCACGCATTCCACAAGGACTGTTTGGACAAATGGTTAAGGGAATCCTGTCCAACATGCCCGCTCTGCAGGAGCAAGGTGGTGCCGGATGATGTTGCGGCCAAATACCATCTGTTTCAGAATCAGGTAGTAGATAATCATGATGCTGGCACTCATAACCAGCTTATACTGTTGTTGTATTCAATTCGGGGTGCTAGTATTCTGCATAGATATCTCTGA 477 0.4591 MVLLVYFLIELVLIVQYLRSETQRTITTKQYLNFIEEKNPTICYTKRRRVLQQVEEAEHEGEDEAEECRVCLSELEEGDKLRNLKCKHAFHKDCLDKWLRESCPTCPLCRSKVVPDDVAAKYHLFQNQVVDNHDAGTHNQLILLLYSIRGASILHRYL* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2833 158 CDD mRING-H2-C3H2C2D_ZSWM2 68 110 - -
Aev03g2833 158 ProSiteProfiles Zinc finger RING-type profile. 68 110 IPR001841 -
Aev03g2833 158 Coils Coil 47 67 - -
Aev03g2833 158 PANTHER - 2 151 - -
Aev03g2833 158 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 21 116 IPR013083 -
Aev03g2833 158 SUPERFAMILY RING/U-box 67 117 - -
Aev03g2833 158 SMART ring_2 68 106 IPR001841 -
Aev03g2833 158 Pfam Ring finger domain 67 110 IPR001841 -
Aev03g2833 158 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 2 151 - -
Aev03g2833 158 SMART ringv_2 67 110 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g2833 Aev-Chr3 27910572 27911048 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g2833 66 121 C3H Transcription Factor Family AT1G15100 53.571 8.71e-17 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g2833 K16282 - gmx:102669811 180.644
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g2833 03 27910572 27911048 Aev03g2833 03 27910572 27911048 ECH