Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2785 ATGGAGGAGGAAGAGCACGAGGTGTACGGAGGAGAGATTCCAGACGTCGCAGAGATGGAAGCTGATATCGACATGTCCGCCGCTGATGACGACGCCGCCGCCGTCAAGGAGCTTGACGAGATGAAGCGCCGCCTCAAGGAGATGGAAGACGAAGCCGCAGCTCTTCGTGAGATGCAAGCTAAGGTCGAAAAGGAAATTGGCTCCGTTCAAGATCCTGCTGCTGCAGCTGCTTCTCAGGCAGGCAAGGAGGAGACAGATTCTCGATCTGTTTTTGTTGGCAATGTTGATTATGCATGCACACCAGAGGAAGTGCAGCAACACTTTCAATCATGTGGCACAGTGAACAGAGTCACTATCCTGACCGATAAGTTTGGCCACCCTAAAGGTTTTGCTTATGTGGAGTTTGTTGAAACTGAAGCTGTTCAAGAGGCCCTCGTCTTGAATGAATCAGAATTGCATGGCCGTCAATTGAAGGTCTTGCCTAAGAGAACCAATGTTCCTGGGATGAAACAGTATCGGCCTAGGCGCTTTAATCCTTACTCGGCATATGGCTTTAGGAGGCCCTATGCTCCTGCTCCTTACTTTTATTCCCCGTACGGATATGGGAAGGTTCCTAGGTTTAGAAGGCCAACTCGTTACATGCCCTACTACTAG 654 0.5015 MEEEEHEVYGGEIPDVAEMEADIDMSAADDDAAAVKELDEMKRRLKEMEDEAAALREMQAKVEKEIGSVQDPAAAAASQAGKEETDSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVETEAVQEALVLNESELHGRQLKVLPKRTNVPGMKQYRPRRFNPYSAYGFRRPYAPAPYFYSPYGYGKVPRFRRPTRYMPYY* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2785 217 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 90 158 IPR000504 GO:0003723
Aev03g2785 217 PANTHER - 1 215 - -
Aev03g2785 217 CDD RRM_II_PABPs 89 160 - -
Aev03g2785 217 Gene3D - 25 160 IPR012677 -
Aev03g2785 217 Coils Coil 31 65 - -
Aev03g2785 217 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 88 164 IPR000504 GO:0003723
Aev03g2785 217 SMART rrm1_1 89 160 IPR000504 GO:0003723
Aev03g2785 217 SUPERFAMILY RNA-binding domain, RBD 79 184 IPR035979 GO:0003676
Aev03g2785 217 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H 1 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g2785 Aev-Chr3 27604107 27607400 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g2785 89 159 Eukaryotic Initiation Factors Gene Family AT2G36660 34.722 4.34e-09 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g2785 K14396 - gmx:100789721 356.681