Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2775 ATGCTGGCTACTCCTATCAAGAAAGTGAAGGTTAATTTCAAGATTGGCAAAGTGAGAGCTGTGATATCTGGTGAAGGAGATTTGCTATCTCACCCTGACAACTTTACAAGCTCTGCTGGAAGAGAAGCCTTGTTAGACAAACATGTTGATAAACCTATAAGAATCAAGCATCAATTAGATACATTTGCTTATGGAACACTCTCTGCAGAGATAAATAATCCTATAATCAATGGTTTCTTTTCTGATGATACCAGTGAACATGATCTTGAATGTCCTACACAAGGGTTTGCTTCCATCCCAGATGCCATTCAAGATATTCGTCAGGGGAAGTTAGTTATTGTTGTGGATGATGAAGATAGAGAAAATGAGGGAGATTTAATAATGGCAGCATCAATGGTAACACCAGAAGCCATTGCCTTTATTGTCAAGCATGGAACTGGAATAGTGTGTGTAAGCATGAAAGAGGAAGACTTAGAGAGGTTGAACCTCCCATTGATGGTGACACAGAAGGACAATGCAGAAAAACTTTGCACTGCATTCACTGTCACAGTGGATGCGAAGCGAGGTACTACAACAGGAGTGTCTGCTCAAGATAGGGCAGCAACAATTCTTGGGCTTGCATCGAGAAATTCGAGGCCTGAGGATTTCAATCGACCAGGACATATCTTTCCCCTCAAGTACAGGGAGGGAGGGGTTCTCAGAAGAGCAGGACACACAGAGGCTTCTGTTGATCTTGCTGTGATGGCTGGATTGGAACCTGTGGCAGTTTTATGTGAGATAGTGGACAATGATGGTTCAATGGCCAGGTTACCAAGGCTCCGGCAATTCGCGGTGGAACAAGACTTGAAGATCATATCCATTGCTGATTTAATCAGATACAGGAGAAAGAGAGAAAAGTTGGTAGAACTTGCTTCTGCTGCATTGATACCCACCAACTGGGGACCTTTCAAAGCTTATTGTTACCGATCATGTCTTGATGGGATTGAGCACATTGCCATGGTTAAGGGTGAGATAGGTGATGGGAATGACATACTTGTGAGAGTGCATTCGGAATGTGTAATTGGTGATATCTTTGGGGCAACAAAATGTAACTGTGGAAAGCAGTTAGGACATGCAATGAAGCAGATTGAAGCAGCAGGTAGGGGTGTCCTTGTGTATCTCAGAGGAAAGGAAGGCAAAGGTATTGGGTTAGCCCACAAGGTACCTACTTATGACTCTGCAGATGATGATGACCATCACGAATTGCAGTTACCTCTTGATTCTCGTGAGTATGGCATTGGAGCACAGATACTACGAGACCTGGGAGTTCATACGATGAGGCTAATGACAAACAATCCTGCTGAGTATGGTGGGCTCAAAGGTTATGGTCTGACAATTGCAGAAAAGAATAATGAATACACGATTCCTCGCGGATCAACGAGTTATAGCCCAGCACCTTCTCCTTCCCCTCATCAATATGATCCATCACTCTCACTCCACAATCCTTTCTCACCAAAACTTCCACTCTTCCCTATTATCCCTGTCCATGATGATGATTGGCTTCACACACACCTACTCCAACTTTCTATGATTGTCGTGGCTTGCACGCTTGGATTTGTCATGTTATTCTGCACCATCTCCTTAATCCGAAGGCACTATTATTATTCCAGGAGACGTAACCATATGAGAGGGAACACACCCATCTTGTTCTATGTCAATGGAGATTCCCCTGTTTCAGCTTCAGATGGTGATGATGATGATGGGCCCATCATTGATCACCCCATATGGCTCATCCGCACCGAGGGGCTCCAGCAATCAGTCATAGATTCCATCACAGTCTTCGTATACAGAAAAGATGAAGGGTTAATTGATGGGACTGAGTGTTCTGTTTGCCTCGGTGAGTTTCAAGATGATGAGAGTCTCAGGCTGTTACCAAAGTGCAGCCACGCTTTTCACATCCCTTGTATTGATACATGGCTTAGATCGCATAAAAATTGCCCCTTGTGCCGTGCACCTGTGGTTCATGATGCCGCTGAGGTTAGAAGAGTCGCTGTGGCTGATTCAAGCGCTTCTGTTGAGAACCAAGAGATTATAAGTACACAGATGGAGAACCATCAATTAGGAGAGAGTGAGATTAGGGCATTGAGGAATGGAGATGATGATGGTGATGGTGATGGTGCTGGTGTGTTATCTAGTGAAGATGGAGGGAGTGAAGAAACCCTAGATAAGGTTTTGCCCATTTTTGACAAGGTGAATTGTGATTCTGTGATAGGGTCACATGAAGAATCGGAAGAGGAAATACAACCTATTAGGAGGTCGGTTTCCATGGATTTATCCTCTGCTGCTTCAGTGATGTTTCATGATGTGGTGGTTGATTTGAGTTGTGATCAAGATAGCTTGGAGACCCAATTAGGTGACAGAATCAATTCAAAGGGCAAGGACATGAAAGTTGAAAAGCAGAGTAGTGGATGTTCCAGTTCCACAGCCATATGCAAATTGGCTTCAATTGGTCGTGTGCTGCAGAAGAGGCCAATCTCATTGAGAGGCTCTTTTTCTTCTTCTTCACAAAACAGGAAATCCTTGTCTTCAAGACACTGTAGGAGCCAGAGTTCAACTTTTCCCTTGTAA 2607 0.4392 MLATPIKKVKVNFKIGKVRAVISGEGDLLSHPDNFTSSAGREALLDKHVDKPIRIKHQLDTFAYGTLSAEINNPIINGFFSDDTSEHDLECPTQGFASIPDAIQDIRQGKLVIVVDDEDRENEGDLIMAASMVTPEAIAFIVKHGTGIVCVSMKEEDLERLNLPLMVTQKDNAEKLCTAFTVTVDAKRGTTTGVSAQDRAATILGLASRNSRPEDFNRPGHIFPLKYREGGVLRRAGHTEASVDLAVMAGLEPVAVLCEIVDNDGSMARLPRLRQFAVEQDLKIISIADLIRYRRKREKLVELASAALIPTNWGPFKAYCYRSCLDGIEHIAMVKGEIGDGNDILVRVHSECVIGDIFGATKCNCGKQLGHAMKQIEAAGRGVLVYLRGKEGKGIGLAHKVPTYDSADDDDHHELQLPLDSREYGIGAQILRDLGVHTMRLMTNNPAEYGGLKGYGLTIAEKNNEYTIPRGSTSYSPAPSPSPHQYDPSLSLHNPFSPKLPLFPIIPVHDDDWLHTHLLQLSMIVVACTLGFVMLFCTISLIRRHYYYSRRRNHMRGNTPILFYVNGDSPVSASDGDDDDGPIIDHPIWLIRTEGLQQSVIDSITVFVYRKDEGLIDGTECSVCLGEFQDDESLRLLPKCSHAFHIPCIDTWLRSHKNCPLCRAPVVHDAAEVRRVAVADSSASVENQEIISTQMENHQLGESEIRALRNGDDDGDGDGAGVLSSEDGGSEETLDKVLPIFDKVNCDSVIGSHEESEEEIQPIRRSVSMDLSSAASVMFHDVVVDLSCDQDSLETQLGDRINSKGKDMKVEKQSSGCSSSTAICKLASIGRVLQKRPISLRGSFSSSSQNRKSLSSRHCRSQSSTFPL* 869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2775 868 CDD GTP_cyclohydro2 300 461 IPR000926 GO:0003935|GO:0009231
Aev03g2775 868 SUPERFAMILY RibA-like 299 462 IPR036144 -
Aev03g2775 868 SUPERFAMILY RING/U-box 609 669 - -
Aev03g2775 868 MobiDBLite consensus disorder prediction 468 488 - -
Aev03g2775 868 Gene3D GTP cyclohydrolase II 301 464 IPR036144 -
Aev03g2775 868 ProSiteProfiles Zinc finger RING-type profile. 621 663 IPR001841 -
Aev03g2775 868 SUPERFAMILY YrdC/RibB 94 298 IPR017945 -
Aev03g2775 868 CDD RING-H2_PA-TM-RING 620 663 - -
Aev03g2775 868 PANTHER GTP CYCLOHYDROLASE II-RELATED 14 462 - -
Aev03g2775 868 TIGRFAM ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 97 294 IPR000422 GO:0008686|GO:0009231
Aev03g2775 868 Pfam GTP cyclohydrolase II 306 462 IPR032677 -
Aev03g2775 868 Gene3D DHBP synthase 86 300 - -
Aev03g2775 868 Pfam Ring finger domain 620 663 IPR001841 -
Aev03g2775 868 MobiDBLite consensus disorder prediction 842 868 - -
Aev03g2775 868 MobiDBLite consensus disorder prediction 708 731 - -
Aev03g2775 868 Pfam 3,4-dihydroxy-2-butanone 4-phosphate synthase 101 293 IPR000422 GO:0008686|GO:0009231
Aev03g2775 868 SMART ring_2 621 662 IPR001841 -
Aev03g2775 868 Hamap 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 94 298 IPR000422 GO:0008686|GO:0009231
Aev03g2775 868 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 595 672 IPR013083 -
Aev03g2775 868 PANTHER BIFUNCTIONAL RIBOFLAVIN BIOSYNTHESIS PROTEIN RIBA 1, CHLOROPLASTIC-LIKE ISOFORM X1 14 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g2775 Aev-Chr3 27524546 27528369 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g2775 584 726 C3H Transcription Factor Family AT1G72220 48.148 2.39e-37 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g2775 K14652 - gmx:100795684 717.227