Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2749 ATGGGAAGCTTAGACCCCACGGCGGAGGAGTTCAGGCCCACTAACCCTAACCACCTCGGTCCACCTCCACCTCCTCCTCCTCCTCAGCCTTACGTTTTTCCCTATCCAGTGGTGCAACTGCAAACGACGCCGTTTTTGGATCATACAAGTGTTGGGGTTACGTGTCCACAGTTTGGCCCTGCCACGCTGTCCACGTCACCCACTCGGTCGCTGCTGCTGAGCTTGGTCCCATCCGAGACGACAGAGTCGACGACGGCGTTGAAAGAGGAGCTCGAAGCTTTTGGAGACGTGAGAGGGGTTCAGATGGAACAAGGGTGGTTGTGTGGTGATGGAATGGCAATGGCCACTGTTCACTTCTATGACCTCCGACATGCCGAGGCGGCCTTCACCGCCATTCGCTGGCACCACATGCATTACCATACAAGGCTTCGCAGCCACCACTACTACTACCCTCCGGCGGCGCGTGTGGTGTGGGCCCAGTATATTGTCCCTGCGTGTGCTGATGGTCAGAACCAAGGGACCATTGTGGTTTTCAATTTGGACCCGAAGGTCGACGCTCATAGTCTCAGACAAATCTTCGAGGCTTTTGGTGATGTGAAGGAGTTGAGGCATACAGCATTAAAAAGGAAGCAAAGATTCGTGGAGTACTTTGATATAAGGGACGCGGCAAGGGCTTTGAAACAGATGAATGGGAAGGAAATTCATGGGAGAGCCCTTGTGATTGAATTCAGTCGACCAGCAGCAGCAGGAAGAGGTCACTACTGCAGCAGCAGCAACAACTTGAAGCCACCACCTCATCATCATCTTAAACCCACACTCAGGCCTCATTATGATTATGATGAACCGTCAAGTGTTACCAAGGGAACAACTGGTGATCATCAAGATAATAAGGCTACTACCGCAAATTTAAATCTTGTTTCTGATAATGATGAAGCAACAACAGCGGCGTTGGATTCGGTGAATTTGAATGATAAGGAAAGACAGCAGTATTCTGAAGGGCCTCCGAAGAGAAATAATTGCATGGGAGGCAGAAGTAGTAGGAACTACTGGAATAATAAGGGAGGGAAGCAGCGGCATGCTAAGAAGCAGCACGATGCTCGCTTTCTAATTAAGGAACAAGATGCTGCTCTCGATTCATCATACATGGATTCTAGAACTACTCTCATGATTAAGAACATACCCAACAAGTACAGTCTGAAGCTACTATTGAACATGTTGGACACGCACTGTAATCACTGCAACGAGCAGATTGGCGAGGACGACCACCAGCCCTTGTCCTCCTACGACTTCGTCTACCTTCCCATTGATTTCAACAACAGGTGCAATGTGGGATATGGATTTGTGAACATGACGTCTCCGGAGGCAACCCTGAGGCTCTACAAGGCTTTCCATAATCAACACTGGCAACTCTTCAATTCTAGAAAAATTTGTGAGGTCACCTACGCTAGACTCCAGGGGTTGGAAGCAGTGAAAGAGCATTTCAAGAACTCCAAGTTCCCGTACGAGATGGAGCAAGAGTGCCTGCCAGTGGTGTTTTCACCGCCTCGAGATGGGAGGCAGCTCACACAGCCACTTGCAATACTTGGCAGTACTAGCAAGCACCAAAAGCAAAAGCAGCACCAATTAATACCAACTTCCACCCTCTCCCTTATTGCTGCACCTGATCATCATGACTTGCTTTGCACCACCCAAAACGGCGGCGTTGAAACTGATGCTGATGCTGATGATGATGATCACTCAACAGGAGGAGCCTCCTGCTCCTGCAGTGAGTGA 1773 0.4969 MGSLDPTAEEFRPTNPNHLGPPPPPPPPQPYVFPYPVVQLQTTPFLDHTSVGVTCPQFGPATLSTSPTRSLLLSLVPSETTESTTALKEELEAFGDVRGVQMEQGWLCGDGMAMATVHFYDLRHAEAAFTAIRWHHMHYHTRLRSHHYYYPPAARVVWAQYIVPACADGQNQGTIVVFNLDPKVDAHSLRQIFEAFGDVKELRHTALKRKQRFVEYFDIRDAARALKQMNGKEIHGRALVIEFSRPAAAGRGHYCSSSNNLKPPPHHHLKPTLRPHYDYDEPSSVTKGTTGDHQDNKATTANLNLVSDNDEATTAALDSVNLNDKERQQYSEGPPKRNNCMGGRSSRNYWNNKGGKQRHAKKQHDARFLIKEQDAALDSSYMDSRTTLMIKNIPNKYSLKLLLNMLDTHCNHCNEQIGEDDHQPLSSYDFVYLPIDFNNRCNVGYGFVNMTSPEATLRLYKAFHNQHWQLFNSRKICEVTYARLQGLEAVKEHFKNSKFPYEMEQECLPVVFSPPRDGRQLTQPLAILGSTSKHQKQKQHQLIPTSTLSLIAAPDHHDLLCTTQNGGVETDADADDDDHSTGGASCSCSE* 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2749 590 Gene3D - 167 252 IPR012677 -
Aev03g2749 590 MobiDBLite consensus disorder prediction 570 590 - -
Aev03g2749 590 MobiDBLite consensus disorder prediction 283 297 - -
Aev03g2749 590 MobiDBLite consensus disorder prediction 254 297 - -
Aev03g2749 590 MobiDBLite consensus disorder prediction 16 31 - -
Aev03g2749 590 PANTHER TERMINAL EAR1-LIKE 1 26 575 - -
Aev03g2749 590 CDD RRM3_EAR1_like 385 486 IPR034458 -
Aev03g2749 590 SUPERFAMILY RNA-binding domain, RBD 173 467 IPR035979 GO:0003676
Aev03g2749 590 MobiDBLite consensus disorder prediction 1 31 - -
Aev03g2749 590 Pfam RNA recognition motif 2 385 495 IPR007201 -
Aev03g2749 590 PANTHER RNA BINDING PROTEIN 26 575 - -
Aev03g2749 590 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 175 239 IPR000504 GO:0003723
Aev03g2749 590 SMART rrm1_1 174 242 IPR000504 GO:0003723
Aev03g2749 590 MobiDBLite consensus disorder prediction 318 365 - -
Aev03g2749 590 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 173 246 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g2749 Aev-Chr3 27404219 27406507 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g2749 81 273 Eukaryotic Initiation Factors Gene Family AT1G34140 24.272 4.00e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g2749 - - adu:107469016 491.886
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g2749 03 27404219 27406507 Aev03g2749 03 27404219 27406507 ECH