Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2736 ATGAAACAGTTCAAATTCCCTGCAAAATTTCACGCCAAAGAGGATAATCATCTTAGGCCCGAGCCGAAAATGGACAATGCAGTTGAAACTCCTGGCAGTCCGCGAAATAGAAATGTAACAGCTAGGTGGAGTCCAGCTGAATCGTGTAGGCCCATGATAGATGAAGCTCCTGTGTTTCATCCTACTGTTGAGGAGTTTGAAGATCCACTTGGCTACATAGCCAGTATACGGCCACATGCTGAACCTTACGGGATATGCAGAATTGTCCCTCCAGCTTGTTGGGTTCCCCCTTGCCCTCTGAAAGAGAAAGATGTTTGGGAAAATGCTAAATTTCCTACCAGGATCCAACAAATTGACTTGCTGCAAAATAGAGAGCCAATGACAAAGAAAAGCAAGGGCAAGAAAAGAAAGCGCAGAAGGCAATCAAAAACAGGTTCATGTAGGAGAAGCTCCAAGTCAGCGTCTGAACCTAATGTTACTGCCGAACCTGAAGAGAAGTTTGGATTCAATTCAGGGTCAGACTTCACTCTGAAGGACTTTGAGCGTTTTGCTGGGTTTTTTAAGCTTTGCTACTTTAGGGTGAATGATCCCATGAATGAGGATCCAAAAGTTGGTGGTGATAATCAGCAAAAGTGGTGGAAGCCCTCTGTTGAGGAAATCGAGGGGGAATACTGGCGTATTGTTGAGCAACCAACGGACGAGGTTGAGGTCTATTATGGAGCTGACTTGGAAACCAGGGCCCTTGGAAGTGGTTTTCCAAAGGCGACATCCTCTACTAACAGCTATTTGGATCAATATGCGTTATCTGGGTGGAATCTGAATAACTTCCCTCGATTGCCAGGATCTGCCCTATGTTTTGAAGGAAGTGATATTTCAGGAGTTCTAGTTCCATGGTTGTATGTTGGAATGTGCTTTTCAACATTTTGCTGGCATGTTGAGGATCATCACCTTTATTCACTCAATTATCTGCACTGGGGTGAGCCAAAAGTATGGTATGGTGTACCTGGAACCCATGCTACAGCTTTGGAAGATGCAATGAGAAAGCACTTGCCTGATTTATTTGAAGAACAACCAAATCTACTCAATGAGTTGGTGACTCTGTTATCTCCTTCAATTCTCAAATCCGAAGGGGTGCCTGTATATCGCACTGTCCAGCATTCTGGGGAATTTGTTATTACTTTTCCAAGGGCATATCACTCTGGCTTCAACTGCGGCTTCAATTGTGCAGAAGCTGTTAATGTGGCTCCTATTGATTGGTTTGTGCATGGCCAGAATGCTGCTGAGCTTTACAGTTTGCAGTGTCGTAAGACATCATTGTCACATGACAAGTTGTTATTTGGATCAGCTCAGGAAGCAGTAAAAGCCCTTGCTGAGCTAACTATTCATGGAAAAGAAAATCTAAAAAGTTTAAAATGGAAAAGTGTCTGTGGGAAAGATGGAGTTCTAACCAAGGCAGTTAAGGCGAGGATAAGGATGGAAAAGGAGAGGCTTGACCGTCTTCTTACTCATTTAAAGATGTTGAAGATGGATAATGACTTTGATTTGGATAAGGAAAGGGAGTGTTTTTCTTGCTTCTATGACTTGCATCTATCTGCTGTAGGGTGCAAGTGCTCTCCTGATAAGTATTCTTGTCTTAGACACTCAAATTTGCTTTGCTCGTGTGGAGTGGATGAAAGATTTGTTCTGCTTCGGTATACCATGGACGAGCTAAGTAGATTGGTTCAAGCATTAGAAGGAGATTCACATGCTACTGGAGTGTGGGGAAATAGAAACTTCGGAGTGGTTTCTGCGAATGCTGAGGATGCTGACATGTATAAATCAAATGTGGAGAGAGACATGTGCAAAACTGAGAGTAATGAAGAAGCATATGGTACTGTTGATTGTCATAATGACAAAATGGATAACAAAGAGTTGGTTATGGATAATGAAGCCATGGTGCAGCCGGCAGGACCTATGGATTTGAATATTGATGTTATGTCTAGTGAACATGAAATTAATTTCCCGCATCTTGCTGGCAACCGTGATAATAAGGGTGTTTCACTTGTGGACAAAACCTGCTATTCAGAGGCCAGCAAGGAACGAGATAATATGGAACTTGATGCTGTTGGTATTGTATCCGACTCAGTTGTTTTGGAGAAAGGGTTTTCACCATGTTCGAGGGATCTTCGAAATTCATGTTCACTTGATGGTTATAAGTTGTTTGGGGTTGATCTGCAAACAAATTCAGATTCAGGAGAACAACTCAACAGTTTACTTAAAACAGGAGTTGCAGAAACCACTGATACTAGTGTGTCCTTGGCAAACCGAAGGCTCTTAATCCATGAGTTTGGTGCTTCTGTTGAGCCCATAATTTTTGGCTCAGTTGTGCATGGAAAGATGTGGTACAGTAAGCATGCGATATATCCGAAAGGATTCAAGAGTCGTGTCAAGTTCTTTAGCATTCTTGATCCAGCAAGCATCTGTTACTATGTTTCTGAAGTCTCTGATGCTGGATTTCTTGGGCCTCTTTTCAAGGTTACTATGGAAGAACATCCAAATGAAGCTTTCACAAACACATCGGCAGAAAAGTGCTGGGAAAAAGTTCTTGACAGATTAAACCATGAAATCAAGAGGCGAAGGAGTCTAGGTGAACTAGAACTTCCTCCCTTGGATCTTCTGCAAAGCATTAATGGCCATAAAATGTTTGGATTCCTTACACCGTCCATTATTCAGGCCATTGAAGCTCAAGATCCCAGCCATCAATGTGTTGATTACTGGAATCACAAAGAAACTGTCTCTGGATCTTCAGGCAATGCTAATGATGACTCCAAGTTCACAAATGGTTCAAGTAATACCGTAGGTGACATCAAGGCCAAACTCTTCGGTTTCGATTTGATAAAGCAAGAGCAAGATGACATAGGAGGAAGTTTTCAATCGTTTGAAGAGGTGAAGTCATTGCTACAAGGATTCCTAAAAAAGGCTAGTCCTGATGAGTTGAGTGCAATGCATAAGCTATTCAGATCTGACGCGCAAGTTGCTCAGTGGAGACCGGCATTCGTCGAGCTGATTCAGGAGATCCAGAAAAGTTGTAGATAA 3075 0.4244 MKQFKFPAKFHAKEDNHLRPEPKMDNAVETPGSPRNRNVTARWSPAESCRPMIDEAPVFHPTVEEFEDPLGYIASIRPHAEPYGICRIVPPACWVPPCPLKEKDVWENAKFPTRIQQIDLLQNREPMTKKSKGKKRKRRRQSKTGSCRRSSKSASEPNVTAEPEEKFGFNSGSDFTLKDFERFAGFFKLCYFRVNDPMNEDPKVGGDNQQKWWKPSVEEIEGEYWRIVEQPTDEVEVYYGADLETRALGSGFPKATSSTNSYLDQYALSGWNLNNFPRLPGSALCFEGSDISGVLVPWLYVGMCFSTFCWHVEDHHLYSLNYLHWGEPKVWYGVPGTHATALEDAMRKHLPDLFEEQPNLLNELVTLLSPSILKSEGVPVYRTVQHSGEFVITFPRAYHSGFNCGFNCAEAVNVAPIDWFVHGQNAAELYSLQCRKTSLSHDKLLFGSAQEAVKALAELTIHGKENLKSLKWKSVCGKDGVLTKAVKARIRMEKERLDRLLTHLKMLKMDNDFDLDKERECFSCFYDLHLSAVGCKCSPDKYSCLRHSNLLCSCGVDERFVLLRYTMDELSRLVQALEGDSHATGVWGNRNFGVVSANAEDADMYKSNVERDMCKTESNEEAYGTVDCHNDKMDNKELVMDNEAMVQPAGPMDLNIDVMSSEHEINFPHLAGNRDNKGVSLVDKTCYSEASKERDNMELDAVGIVSDSVVLEKGFSPCSRDLRNSCSLDGYKLFGVDLQTNSDSGEQLNSLLKTGVAETTDTSVSLANRRLLIHEFGASVEPIIFGSVVHGKMWYSKHAIYPKGFKSRVKFFSILDPASICYYVSEVSDAGFLGPLFKVTMEEHPNEAFTNTSAEKCWEKVLDRLNHEIKRRRSLGELELPPLDLLQSINGHKMFGFLTPSIIQAIEAQDPSHQCVDYWNHKETVSGSSGNANDDSKFTNGSSNTVGDIKAKLFGFDLIKQEQDDIGGSFQSFEEVKSLLQGFLKKASPDELSAMHKLFRSDAQVAQWRPAFVELIQEIQKSCR* 1025
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2736 1024 SMART fyrc_3 836 931 IPR003889 GO:0005634
Aev03g2736 1024 Gene3D - 779 916 - -
Aev03g2736 1024 SUPERFAMILY Clavaminate synthase-like 229 453 - -
Aev03g2736 1024 SMART JmjN_1 55 96 IPR003349 -
Aev03g2736 1024 MobiDBLite consensus disorder prediction 1 43 - -
Aev03g2736 1024 PANTHER LYSINE-SPECIFIC DEMETHYLASE 10 621 - -
Aev03g2736 1024 MobiDBLite consensus disorder prediction 129 146 - -
Aev03g2736 1024 Pfam C5HC2 zinc finger 521 572 IPR004198 -
Aev03g2736 1024 PANTHER DEMETHYLASE JMJ14-LIKE PROTEIN, PUTATIVE-RELATED 620 1022 - -
Aev03g2736 1024 Gene3D Cupin 41 415 - -
Aev03g2736 1024 ProSiteProfiles JmjN domain profile. 56 97 IPR003349 -
Aev03g2736 1024 Pfam jmjN domain 57 90 IPR003349 -
Aev03g2736 1024 ProSiteProfiles FYR domain FYRN motif profile. 772 830 IPR003888 GO:0005634
Aev03g2736 1024 ProSiteProfiles FYR domain FYRC motif profile. 832 922 IPR003889 GO:0005634
Aev03g2736 1024 SMART fyrn_3 786 830 IPR003888 GO:0005634
Aev03g2736 1024 ProSiteProfiles JmjC domain profile. 265 431 IPR003347 -
Aev03g2736 1024 PANTHER DEMETHYLASE JMJ14-LIKE PROTEIN, PUTATIVE-RELATED 10 621 - -
Aev03g2736 1024 PANTHER LYSINE-SPECIFIC DEMETHYLASE 620 1022 - -
Aev03g2736 1024 Pfam F/Y rich C-terminus 834 921 IPR003889 GO:0005634
Aev03g2736 1024 MobiDBLite consensus disorder prediction 7 24 - -
Aev03g2736 1024 MobiDBLite consensus disorder prediction 120 165 - -
Aev03g2736 1024 Pfam JmjC domain, hydroxylase 298 414 IPR003347 -
Aev03g2736 1024 Pfam F/Y-rich N-terminus 785 827 IPR003888 GO:0005634
Aev03g2736 1024 SMART cupin_9 265 431 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g2736 Aev-Chr3 27321178 27326827 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g2736 748 959 JUMONJI Transcription Factor Family AT1G30810 48.598 4.90e-50 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Aev03g2736 JmjC 2.7e-47 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g2736 - - gmx:100784581 1542.32