Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2725 ATGGTGGGTTCATCATCAACAGCTACTCCACTTTGGCGCAATGGACCAGAAGGGAAGCCAGTGCTGTGCAATGCATGTGGGTCGAGGTACAAGCTCTGCGGCCACCTCAATGGCTATATGCCAAGGCATTTTCACAGCGGCCTTCGCAAGAACCTTCAGAATTTCAACGACGCTGGCAATTCCAATGTTGAGGACAAGCCACCTTCCGCTCACAATCTTCCAACTTCAGGAAGGAGAATTCTAAGCTTTTGGGATAATATCCCTTCAAGGAAGCGTTCAAGGGTGGTGTACGAGAAGATTACACCAATGATGAAGTTTCGGAATGAGCTTTACAAGTTGTGGAGGGTTTATGGGAATCCGAATGAAGAAGAAGAGGTTCTGTTGGACCAAAACTTGACCAACAACTTCATTCCTAGCAATGAGATAGGGCTTGGAGCAATGATACTTAAACCACATGACGATGATGCTCCTCCTCCTCCAAAGAAGCCCTGTAATAATTAA 501 0.4631 MVGSSSTATPLWRNGPEGKPVLCNACGSRYKLCGHLNGYMPRHFHSGLRKNLQNFNDAGNSNVEDKPPSAHNLPTSGRRILSFWDNIPSRKRSRVVYEKITPMMKFRNELYKLWRVYGNPNEEEEVLLDQNLTNNFIPSNEIGLGAMILKPHDDDAPPPPKKPCNN* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2725 166 ProSiteProfiles GATA-type zinc finger domain profile. 1 34 IPR000679 GO:0006355|GO:0043565
Aev03g2725 166 SMART GATA_3 5 49 IPR000679 GO:0006355|GO:0043565
Aev03g2725 166 Pfam GATA zinc finger 6 35 IPR000679 GO:0006355|GO:0043565
Aev03g2725 166 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 6 37 - -
Aev03g2725 166 MobiDBLite consensus disorder prediction 55 74 - -
Aev03g2725 166 Gene3D - 4 61 IPR013088 GO:0006355|GO:0008270
Aev03g2725 166 PANTHER GATA ZINC FINGER PROTEIN 6 153 - -
Aev03g2725 166 MobiDBLite consensus disorder prediction 55 69 - -
Aev03g2725 166 CDD ZnF_GATA 5 43 IPR000679 GO:0006355|GO:0043565
Aev03g2725 166 PANTHER OSJNBB0038F03.10 PROTEIN 6 153 IPR044589 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g2725 Aev-Chr3 27276478 27277519 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g2725 7 91 C2C2-Gata Transcription Factor Family AT5G47140 40.000 1.57e-11 59.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Aev03g2725 GATA 1.9e-11 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g2725 - - ccaj:109803880 130.568
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g0867 04 5280758 5284046 Aev03g2725 03 27276478 27277519 PCT