Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2689 ATGACATTGAATAATAGACGATTTGAATACGCGACGACGCCTGCATCGAGTAAAAGAAAAGTGAAGGACTTATTGCTTCAAAAGGATAATAAATTTTGTGCTGATTGTAATGCTCCAGATCCTAAATGGGCGTCTGCCAATATTGGAGTTTTTGTATGCTTAAAATGTTGTGTTGTCCACAGAAATCTTGGTACTCATATATCAAAGGTAATGTCAGTGACATTGGATAAATGGTCAAATGAGGAAATAGATGCTATGATTGAAGTTGGAGGAAACTCCTCTGCAAATTCAATTTATGAGGCTTATATTCCAGAAGGATATAAAAAACCTGGACCAGATGCCAGTCACGAGGAGCGTGCGAAATTCATCCGTGCAAAGTACGATCATCAAGAATTTTTGAAACCAAGTTTGCGCATTCTGTCAACTAAATCCTCTCATTCTCATAGACTAAGTTTTTCTGAAAGGATAAGGAATAGCTTTCGAAGTACTACTACTACTGAATCACAGAACAGGGAAGGAATGGTAGATTATCTTGGAATGTTGAAGGTGAAAGTGATTAAAGGCACAAATTTAGCTGTCAGAGATATGATGACGAGTGATCCATACGTCGTCCTGAAACTTGGCCAACAGACTGTTCAGACAACTGTAAAAAACAGCAATCTGAATCCAGTGTGGAATGAGGAGCTTATGTTGTCTGTCCCTCAGCAATTTGGGGCAATGAATTTGAAGGTGTTTGATCATGACGTGTTTTCAGCTGATGATGTAATGGGAGAAGCAGAGGTGGATCTTCAGCCACTGATTACATCTGCAATGGCATTTGGAGATGCTGGACTGTTTGAGGATATACCGATAGGAAAATGGCTGAAATCCCATGACAATGCCCTTAAATGTGACAGCATAATCAATATTACTGATGGTAAGATTAAACAACAACTCTCACTTTTGCTCCAGAACGTTGAATCTGGAGAGTTAGACTTAGAACTTGAGTGGATCCCTCTTGATCATTAG 1008 0.3919 MTLNNRRFEYATTPASSKRKVKDLLLQKDNKFCADCNAPDPKWASANIGVFVCLKCCVVHRNLGTHISKVMSVTLDKWSNEEIDAMIEVGGNSSANSIYEAYIPEGYKKPGPDASHEERAKFIRAKYDHQEFLKPSLRILSTKSSHSHRLSFSERIRNSFRSTTTTESQNREGMVDYLGMLKVKVIKGTNLAVRDMMTSDPYVVLKLGQQTVQTTVKNSNLNPVWNEELMLSVPQQFGAMNLKVFDHDVFSADDVMGEAEVDLQPLITSAMAFGDAGLFEDIPIGKWLKSHDNALKCDSIINITDGKIKQQLSLLLQNVESGELDLELEWIPLDH* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2689 335 PRINTS HIV Rev interacting protein signature 30 49 IPR001164 GO:0005096
Aev03g2689 335 PRINTS HIV Rev interacting protein signature 49 66 IPR001164 GO:0005096
Aev03g2689 335 PRINTS HIV Rev interacting protein signature 70 91 IPR001164 GO:0005096
Aev03g2689 335 ProSiteProfiles ARF GTPase-activating proteins domain profile. 18 132 IPR001164 GO:0005096
Aev03g2689 335 CDD C2_ArfGAP 178 322 - -
Aev03g2689 335 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD12 14 335 IPR044518 GO:0005096|GO:0005543
Aev03g2689 335 ProSiteProfiles C2 domain profile. 161 276 IPR000008 -
Aev03g2689 335 SMART C2_3c 180 275 IPR000008 -
Aev03g2689 335 CDD ArfGap 21 127 - -
Aev03g2689 335 SMART arf_gap_3 19 140 IPR001164 GO:0005096
Aev03g2689 335 Gene3D Arf GTPase activating protein 3 138 IPR038508 -
Aev03g2689 335 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD10 14 335 - -
Aev03g2689 335 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 177 272 IPR035892 -
Aev03g2689 335 Pfam Putative GTPase activating protein for Arf 19 134 IPR001164 GO:0005096
Aev03g2689 335 Gene3D C2 domain 177 335 IPR035892 -
Aev03g2689 335 SUPERFAMILY ArfGap/RecO-like zinc finger 18 135 IPR037278 -
Aev03g2689 335 Pfam C2 domain 180 269 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g2689 Aev-Chr3 27040848 27043353 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g2689 14 335 C2H2 Transcription Factor Family AT4G21160 67.278 4.85e-177 492
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g2689 K12486 - gmx:100777084 514.227