Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2663 ATGGGAATACAGGGACTTTTGCCGCAATTGAAATCGATAATGGTTCCGATTCACATCAAGGACCTCAAGGGTTGTTCTGTAGCTGTAGACACCTATTCTTGGCTCCACAAAGGCGCATTGTCCTGTAGCACCCAGCTCTGCAAACGCTTACCCACTTCCAGGCACATTGAGTATTGCATGCATAGAGTAAATCTGCTGCGCCACTTTGGTGTTAACCCTATTCTAGTATTTGATGGAGGACTTCTCCCTATGAAGGCTGAACAAGAGAACAAGCGTGCCAGGGTAAGGAAGGAAAATTTTGAGCGTGCAGTTGAACATGAGTCAAATGGAAATGCTACTGCTGCTTTTGAGTGCTACCAGAAAGCTGTGGATATTTCACCTCTGATCGCACGCGAGCTAATTCAGGTATTGAAGCAGGAGAATGTGCAATATGTTGTAGCTCCATACGAGGCAGATGCCCAGATGGCTTTCTTGGCAATTAGCGGTCGGGTTGATGCAGTTATAACTGAAGACTCTGATCTTATACCATTTGGCTGCCCAAGGATTATCTTCAAAATGGACAAGTTTGGTCAAGGAGTGGAGTTTCAGTACTCCATGTTACAGAAGAATAAGGAGCTTAGTTTTGAAGGATTCAGCAGACAAATGCTTCTTGAAATGTGCATTTTGAGCGGCTGTGACTATCTTCAGTCCTTGCCAGGTATGGGTCTCAAAAGAGCCCATGCAATCATCAAAAGATTTAAAAGTTATGACAAGGTTCTTAAGCACTTGAGATACAGTGGTGTTTCTGTGCCTCCCTCTTATGAAGAGTCATTCCGGAAGGCTATACTCACTTTTCAATATCAACGGGTGTATGATCCAATTACTGAAGATATTGTCCATTTGTCTAATATACCTGATGATATTGGGGACGAGTTGGATTTTTTAGGCCCATATCCTTCATTTTTAAGTCATACCTTAACATGGGATACACCAATCCCAAAAGATATAGCACAAGGCATAGGCAAAGGAGATCTTGACCCGTTTACGAAAATGCCATTTGAGGAAGAGGATTTTACTGCCAGATTGGCAACTGCAGGAACCTCTCAATTTAAAATTCTTCATGCTGAAACTGTGAAGAAAAAGATTGATCTGCCCGTGCAGAAAAATCTCTTGACCAAGTATTTTTGTTTTGCATCTCTTGAAGCAAAAAGGAAATTCAGAGCACCTCGAATATCACCTACTATTGCTAATCATACTACATTAGATTCCACTTCTCTCGATTCCCGGGAACAAGAGACTTTAGAGGCTACAGCTAGAGAAACAGAGAATTCTGCAAGATCCATAGTTAGCTCCGAGAATCGGGGCAATGGCCCTCCTCCAAATAACTATGTTATTGAAAACAGTTTAGCCACCAATTTTTCAGAGCATGTGGAGTCTCCATCTCATGTTTCTTTGGTGGGCGATAGGAATAGAAGTCCTGAACATACAATACTGTGGCAAGCTAGTAAGCCAATTCATAAACCTTGCATTGGGTTGCATAAGGAGCATGAGTACACAAATATTCAAGACTCGATTGAAACAAAAACCAAAGAGGCAACGAGAAAGGTAATTGTAAGGAGCCGTTATTTTCAGCACAAGAAAGTAGAGAAGAATGATGGTGATGAGAAACAAGATCTCCTATCTGAAGCTGCAATTCTAAGTGGTGAGAAGAAAAATACCATATATGACAGTGATTTAAGTACCAATCACATGACAAATAAAGACTTGAAGAGGAAGATCTCCCCTTATGACAATATTCAGAATGAAAATTTGCAGCCCAGGCAAATGCCTCCAACAACTTCACCTCCTCATAATGATGGTTACTGTGATCAGAGTGTTGATAAAACATTGACAGAAAATAATAATTCTGAAGGAAAATTTGGTTCAAACATTTCCCACATAGACCAGTATTCAGAAATAGCTGAGAAGTCTATGGAAAGATTCGTCTCCGTGATATCATCATTCAGATGCTCTAAAGGGTCTCGTGCTAGTGGTCTCCGAGCTCCTCTGAAAGATGTTCGCAACACTTGCAACAATAATAGACCTACAAATATGGACTTCGGACAATATGCATATGTGCCAACAAAGCAAAGGAAGATTAGCAGAATAGGTCCTGGGAATTGA 2142 0.4108 MGIQGLLPQLKSIMVPIHIKDLKGCSVAVDTYSWLHKGALSCSTQLCKRLPTSRHIEYCMHRVNLLRHFGVNPILVFDGGLLPMKAEQENKRARVRKENFERAVEHESNGNATAAFECYQKAVDISPLIARELIQVLKQENVQYVVAPYEADAQMAFLAISGRVDAVITEDSDLIPFGCPRIIFKMDKFGQGVEFQYSMLQKNKELSFEGFSRQMLLEMCILSGCDYLQSLPGMGLKRAHAIIKRFKSYDKVLKHLRYSGVSVPPSYEESFRKAILTFQYQRVYDPITEDIVHLSNIPDDIGDELDFLGPYPSFLSHTLTWDTPIPKDIAQGIGKGDLDPFTKMPFEEEDFTARLATAGTSQFKILHAETVKKKIDLPVQKNLLTKYFCFASLEAKRKFRAPRISPTIANHTTLDSTSLDSREQETLEATARETENSARSIVSSENRGNGPPPNNYVIENSLATNFSEHVESPSHVSLVGDRNRSPEHTILWQASKPIHKPCIGLHKEHEYTNIQDSIETKTKEATRKVIVRSRYFQHKKVEKNDGDEKQDLLSEAAILSGEKKNTIYDSDLSTNHMTNKDLKRKISPYDNIQNENLQPRQMPPTTSPPHNDGYCDQSVDKTLTENNNSEGKFGSNISHIDQYSEIAEKSMERFVSVISSFRCSKGSRASGLRAPLKDVRNTCNNNRPTNMDFGQYAYVPTKQRKISRIGPGN* 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2663 713 Pfam XPG N-terminal domain 1 98 IPR006085 GO:0004518
Aev03g2663 713 PANTHER EXONUCLEASE 1 1 685 IPR032641 GO:0006281|GO:0035312
Aev03g2663 713 SUPERFAMILY PIN domain-like 2 226 IPR029060 -
Aev03g2663 713 CDD PIN_EXO1 1 202 IPR044752 GO:0046872
Aev03g2663 713 SMART xpgineu 138 208 IPR006086 GO:0004518
Aev03g2663 713 MobiDBLite consensus disorder prediction 569 610 - -
Aev03g2663 713 MobiDBLite consensus disorder prediction 415 455 - -
Aev03g2663 713 MobiDBLite consensus disorder prediction 589 610 - -
Aev03g2663 713 SMART xpgn3 1 99 IPR006085 GO:0004518
Aev03g2663 713 Gene3D - 209 281 - -
Aev03g2663 713 Gene3D - 1 207 - -
Aev03g2663 713 SMART HhH_4 213 246 IPR008918 GO:0003677|GO:0003824
Aev03g2663 713 Pfam XPG I-region 141 226 IPR006086 GO:0004518
Aev03g2663 713 SUPERFAMILY 5' to 3' exonuclease, C-terminal subdomain 211 310 IPR036279 -
Aev03g2663 713 CDD H3TH_EXO1 214 285 IPR037315 GO:0003677|GO:0035312
Aev03g2663 713 MobiDBLite consensus disorder prediction 433 455 - -
Aev03g2663 713 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 216 231 IPR006084 -
Aev03g2663 713 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 73 92 IPR006084 -
Aev03g2663 713 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 24 38 IPR006084 -
Aev03g2663 713 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 158 178 IPR006084 -
Aev03g2663 713 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 137 154 IPR006084 -
Aev03g2663 713 PANTHER FLAP ENDONUCLEASE FAMILY MEMBER 1 685 IPR006084 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g2663 Aev-Chr3 26921864 26925711 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g2663 1 267 Core DNA Replication Machinery Family AT5G26680 26.429 7.01e-18 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g2663 K10746 - gmx:100798062 952.97