LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev03g2653	ATGCTATCTACTAGGAACTCTCTTTCTTTCGTAATCATTGCTTTGAGTTGTTTCACATGGCTCAGATTCGCACAATCCAAATTACCTCAGCAAGAGGTTGATGCTCTTAAAGAAATCACTACCACGATGGGTGCCACTTACTGGAAGTTTGATAGTGATTCTTGTCAAATTGAAATTGTGGGGTTGACACCAGAGCCACCAAATGGATCTGAAAGCAGCATTGGCTGTGACTGCTCCTCTGAAACTGACAACTTCTGTCATGTAGTAAGGATTATGTTCAAGGGGTACAACCTTCCTGGTATGCTTCCACCTCAACTGGTTAAGCTTCCTTACCTCACAGAAATTGATTTTGCTCTTAATTACCTAAATGGTACAATTCCAAAGGAATGGGCTTCAATGAAACTGAGTTTAATTTCTCTACTTGTTAATCGGTTATCAGGGGAAATTCCTGTGGAGTTGGGAAATATTACAACTTTAACATACCTGAACCTTGAAGCAAACCAATTCTCTGGTCTTGTCCCATCTCAACTTGGAAGTCTATTTAACTTGCAGACTTTAATTTTATCATCCAATAACTTGTCTGGGAACTTACCAGGGACATTTGCTCTGTTGCAGAACTTGACAGATTTTAGGATAAATGATAATAATTTCAGTGGAAAAATACCTAGCTTCATACAGAATTGGAAACTTCTTCAAAGACTAGAAATGCATGCAAGTGGACTGGAGGGGCCTATCCCATCAAATATATCTCTTTTGAGTAATTTATCTCAACTGAGGATTAGTGACATAAATAGTCCAAGTCAGAGTTTTCCTATTCTAAGCAACATGACAGGAATGATAAGATTGATTTTGAGAAATTGTAATATCACTGGAGAGCTTCCCAGCTACTTCTGGTCGATGAAGAGCTTGGAAATGTTGGATCTCAGTTTTAATAAGTTAGTTGGGGAAATTCCAGGAACTGAACATGTGGGGCATCTGAGATTTCTCTTCCTAACTGGAAACAGACTAAGTGGTGATGTACCCGACTCGATCTTGATGGATGGAAGCAATGTTGATCTTTCTTATAACAACTTTACATTGCAAGGTCCTGGGCGATCTACTTGTCGAGATGATCTGAATTTAAACTTGAACTTATTCCGGAGCGCCTCAGGGGTCAACCAATCACAGGATATGCTTCCATGTGTGAAGACCTTTAACTGTCCTAGATATTCAAGTTGTTTGCATGTTAATAGTGGCGGAAAGGATGTGACGGCGATGGAAAATGATGAAAATATTCTGTATCTAGGAGATGGTGATGTGGTTGGTGGTGCTGCTAAGTATTTTAATGATAATGAAAATCATTGGGGGTTTAGTAGCACAGGGGACTTCATGGATGATGGTGACTTCCAAAATACACGTTATACCAGGTCGTCATCTTCAAATATGCCTCAATTATATGCAACGGCACGTGTGTCTCCCATTTCGCTCACATACTTTCACTATTGTTTGGAAAATGGGAAATATACTGTGAATCTCCATTTTGCAGAAATACAATTCACCAATGATAGGACATACAAAAGCCTTGGGAGGCGCTTCTTTGATATCTATGTCCAGGAAAAATTAGTTCGGAAGGATTTTAATATCGAAGATGAAGCACATGCTGCTCAAAAACCACATATAATATCAATATACAATGTCACTGTTGCAAACAATATTCTGGAGATTCGATTCTATTGGGCTGGCAAAGGGACTACCAGAATTCCTGCAAGTGGAGTTTATGGTCCCCTCATATCTGCTTTGTCTATTGTTTCTGATTCTAAACCTTGTTCAGATCGAAAAAAGGGATCGAGTAATATAGTCATTGGGGTTGCATGTGGAGTTGCAGCTCTTGGCCTAGTCCTTATTATACTAGGAATCTTTTGGTGTAAAGGCTGCTTCAAAGGAATAGTTAGTAGAGAAACAGGTATCAATGGACAAGATTCTCAAACAGGAACATTTACATTCAAACAAATTAGAGCGGCCACAGATGATTTCAATCCAGCTAACAAGATTGGGGAAGGTGGTTTTGGTCCTGTCTACAAGGGCCAGTTATCTGATGGTACTTGGGTAGCAGTCAAACAACTTTCATCAAAGTCACGTCAAGGGAACCGTGAATTTTTAAATGAGATTGGCATGATATCTTGTTTGCAACACCCTAATCTTGTGAAACTTCATGGATTTTGCATTGAAAAAGATCAATTGATGTTGGTGTATGAGTACATGGAAAATAATAGCCTGGCTCGTGCTTTATTCAGTTCGAAAAATCTGCTTAAACTTGATTGGCCAACTAGGCATAGGATCTGTATTGGGATAGCAAAAGGTCTTGCATTTCTTCATGAAGAATCAATACTCAAGATCGTTCATCGAGATATCAAAGCTACCAATGTGCTACTGGATGAGAATTTAAGCCCTAAAATATCTGACTTTGGGTTGGCAAGGCTTCATGAAGACGAGAAGACACACATCAGCACCAGAGTTGCTGGGACTATAGGATACATGGCACCCGAATATGCATTATGGGGTTACTTGACTTATAAGGCTGATGTTTACAGTTTTGGAGTCGTAGTCTTGGAAATTGTCAGTGGGAAGAACAACAACGATTACATGCCGAGTGATAATTGTGTCTGTCTTTTAGATAGGGCATGTCATCTACAACGCAATGCAAACTTCATGAAACTTGTTGATGAAAGGTTGGGATCAGATGTAAACACAAGTGAAGCAGAAAATATGGTGAAAGTAGCTCTGCTGTGCACGAATGCATCGCCATCACTTCGGCCTACAATGTCCGAGGTTGTTAACATGCTTGAAGGAAGAATGGAAATTCCAGATGTTACTCCAGAAGCAAGTAGTTTCAGTGAAGATTTAAGGTTCAAAGCCATGAGGGACATCCATCAAAATAGGGAAAGTCTAAGTTTGAGATCAAGCATAACAGAGAATTCAAGAGGAGTTCATGCACCTAGCTCTTCCTCAATATCAATATCTGGCCATGACACACATGAGATCTCCTCAGAATCATAA	3036	0.3962	MLSTRNSLSFVIIALSCFTWLRFAQSKLPQQEVDALKEITTTMGATYWKFDSDSCQIEIVGLTPEPPNGSESSIGCDCSSETDNFCHVVRIMFKGYNLPGMLPPQLVKLPYLTEIDFALNYLNGTIPKEWASMKLSLISLLVNRLSGEIPVELGNITTLTYLNLEANQFSGLVPSQLGSLFNLQTLILSSNNLSGNLPGTFALLQNLTDFRINDNNFSGKIPSFIQNWKLLQRLEMHASGLEGPIPSNISLLSNLSQLRISDINSPSQSFPILSNMTGMIRLILRNCNITGELPSYFWSMKSLEMLDLSFNKLVGEIPGTEHVGHLRFLFLTGNRLSGDVPDSILMDGSNVDLSYNNFTLQGPGRSTCRDDLNLNLNLFRSASGVNQSQDMLPCVKTFNCPRYSSCLHVNSGGKDVTAMENDENILYLGDGDVVGGAAKYFNDNENHWGFSSTGDFMDDGDFQNTRYTRSSSSNMPQLYATARVSPISLTYFHYCLENGKYTVNLHFAEIQFTNDRTYKSLGRRFFDIYVQEKLVRKDFNIEDEAHAAQKPHIISIYNVTVANNILEIRFYWAGKGTTRIPASGVYGPLISALSIVSDSKPCSDRKKGSSNIVIGVACGVAALGLVLIILGIFWCKGCFKGIVSRETGINGQDSQTGTFTFKQIRAATDDFNPANKIGEGGFGPVYKGQLSDGTWVAVKQLSSKSRQGNREFLNEIGMISCLQHPNLVKLHGFCIEKDQLMLVYEYMENNSLARALFSSKNLLKLDWPTRHRICIGIAKGLAFLHEESILKIVHRDIKATNVLLDENLSPKISDFGLARLHEDEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVVLEIVSGKNNNDYMPSDNCVCLLDRACHLQRNANFMKLVDERLGSDVNTSEAENMVKVALLCTNASPSLRPTMSEVVNMLEGRMEIPDVTPEASSFSEDLRFKAMRDIHQNRESLSLRSSITENSRGVHAPSSSSISISGHDTHEISSES*	1012

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aev03g2653	1011	MobiDBLite	consensus disorder prediction	976	1011	-	-
	Aev03g2653	1011	ProSiteProfiles	Prokaryotic membrane lipoprotein lipid attachment site profile.	1	17	-	-
	Aev03g2653	1011	SUPERFAMILY	Protein kinase-like (PK-like)	653	964	IPR011009	-
	Aev03g2653	1011	PANTHER	PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA	67	962	-	-
	Aev03g2653	1011	ProSiteProfiles	Protein kinase domain profile.	671	945	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Aev03g2653	1011	SUPERFAMILY	L domain-like	78	343	-	-
	Aev03g2653	1011	Pfam	Protein tyrosine and serine/threonine kinase	675	941	IPR001245	GO:0004672\|GO:0006468
	Aev03g2653	1011	Gene3D	Ribonuclease Inhibitor	268	369	IPR032675	-
	Aev03g2653	1011	PANTHER	RECEPTOR-LIKE KINASE IN FLOWERS 1-RELATED	67	962	-	-
	Aev03g2653	1011	Gene3D	Phosphorylase Kinase; domain 1	642	746	-	-
	Aev03g2653	1011	Gene3D	-	404	600	-	-
	Aev03g2653	1011	Gene3D	Transferase(Phosphotransferase) domain 1	747	954	-	-
	Aev03g2653	1011	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	792	804	IPR008271	GO:0004672\|GO:0006468
	Aev03g2653	1011	Pfam	Malectin domain	406	593	IPR021720	-
	Aev03g2653	1011	CDD	STKc_IRAK	677	943	-	-
	Aev03g2653	1011	Gene3D	Ribonuclease Inhibitor	48	198	IPR032675	-
	Aev03g2653	1011	Gene3D	Ribonuclease Inhibitor	199	267	IPR032675	-
	Aev03g2653	1011	SMART	serkin_6	671	941	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Aev03g2653	1011	MobiDBLite	consensus disorder prediction	976	1004	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev03g2653	Aev-Chr3	26862424	26868490	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aev03g2653	6	836	Receptor kinase-like Gene Family	AT1G29750	62.545	0.0	1060

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Aev03g2653		PK_Tyr_Ser-Thr	9.7e-52	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev03g2653	-		-	vra:106779815	1399.03