Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2650 ATGGGTGACATTGTTTTGAATAATGGAAACAAAGATGGCTTCTCCAAAACAAGTACCGAAGAACAAGAAGCCTCTGACAACAGCCCCTACCTTGTTCTGTTGCAGAAGATGGTGGCAGAGGCAGTGGGAACATATATGCTGATATTTGCAGGGTGTGCATCGGTGGTGGTGGACAAGAACAATGGGCATGTGGTGACACTTCCTGGGATCTCAATTGTCTGGGGTTTGGCTGTCGTTGTGATTGCCTACTCCATCGGTCACGTGTCTGGTGCCCATTTGAATCCTGCTGTGACCATTGCTTTTGCCTCTGTGAGAAGGTTCCCGATGACGCAGGTGCCGGCTTATATAGCAGCTCAGCTTCTGGGGGCAATCCTTGGAAGCGGGACTCTGAGGCTGATGTTTACAGGCACGCATGATCAGTTCTCGGGAACACTCCCAACAGGCTCTAATGGACAAGCTTTTGCCACTGAATTCATTATCACTTTCTTCCTCATGTTTGTCATTTCCGCTGTTGCTACTGATAGCAGGGCGATTGGTGACTTGGCTGGGATAGCAATTGGATCTACAATTCTTCTGAATGTGATGATTGCAGCGCCAATAACAGGAGCATCAATGAACCCGGTAAGAAGCCTAGGACCATCTATGGTGCACCATGAGTACAGAGGAATATGGATATACTTGCTATCACCAATTCTAGGGGCAGTGGCTGGGGCTTGGGTCTACAACTTCCTCAGGGAGAAACCGCTCCAAGAGATTATCTCCAACAACACTAGTACATCCATCATTTAA 789 0.4804 MGDIVLNNGNKDGFSKTSTEEQEASDNSPYLVLLQKMVAEAVGTYMLIFAGCASVVVDKNNGHVVTLPGISIVWGLAVVVIAYSIGHVSGAHLNPAVTIAFASVRRFPMTQVPAYIAAQLLGAILGSGTLRLMFTGTHDQFSGTLPTGSNGQAFATEFIITFFLMFVISAVATDSRAIGDLAGIAIGSTILLNVMIAAPITGASMNPVRSLGPSMVHHEYRGIWIYLLSPILGAVAGAWVYNFLREKPLQEIISNNTSTSII* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2650 262 TIGRFAM MIP: MIP family channel proteins 39 241 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aev03g2650 262 PRINTS Major intrinsic protein family signature 35 54 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aev03g2650 262 PRINTS Major intrinsic protein family signature 156 174 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aev03g2650 262 PRINTS Major intrinsic protein family signature 111 130 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aev03g2650 262 PRINTS Major intrinsic protein family signature 187 209 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aev03g2650 262 PRINTS Major intrinsic protein family signature 224 244 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aev03g2650 262 PRINTS Major intrinsic protein family signature 74 98 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aev03g2650 262 SUPERFAMILY Aquaporin-like 32 250 IPR023271 -
Aev03g2650 262 PANTHER AQUAPORIN NIP2-1 15 254 IPR034294 -
Aev03g2650 262 CDD MIP 35 244 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aev03g2650 262 MobiDBLite consensus disorder prediction 1 22 - -
Aev03g2650 262 PANTHER NODULIN-26 15 254 - -
Aev03g2650 262 Pfam Major intrinsic protein 33 241 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aev03g2650 262 ProSitePatterns MIP family signature. 92 100 IPR022357 -
Aev03g2650 262 Gene3D Glycerol uptake facilitator protein. 6 256 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g2650 Aev-Chr3 26849951 26851696 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g2650 22 252 Major Intrinsic Protein MIP AT5G37820 58.547 5.00e-94 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g2650 K09874 - gmx:100813448 343.969