Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2648 ATGGATGAAGGTCAGGGAAGTTCCAGTTCCCTTCCTCCTTTCCTGGCCAAGACTTATGAGATGGTGGATGATCCTGCCACTGATTCCATTGTTTCTTGGAGTGCCACTAATAGAAGTTTCATTGTGTGGAATCCTCCCGATTTCGCGAGGGACTTGCTCCCTAGATTCTTTAAGCACAATAACTTCTCGAGTTTTATCAGGCAGCTGAACACCTATGGGTTTAAGAAAGCTGACCCAGAACAATGGGAATTTGCAAATGATGATTTTGTAAGAGGGCAACCGCATCTAATGAAGAATATCCATAGACGAAAGCCTGTTCATAGCCATTCCTTACAGAATCTCCAAGCGCAAGCTCCACTAACAGAATCAGAAAGGAAGAGTTTAAAAGATGATATAGAGAAGCTTAGACATGACAAAGAACAGCTTCTTATGGATCTGCAGAGACATGAACAGGAGTGGCAAATGTATGAAATGCAACTACATTGCTCTAAAGATCGTTTGGAGAACTTGGAGCACAATCAACAAAAGATGATCTCCTCTGTTTCCCAAGTGTTGCAGAAACCTGGGATTGCACTAGATCTCTTGTCACTGACCGAAACCACGGATAGAAAACGAAGGTTGCCCAGAAGTGGCTACTTTGGTGATGAAGCTAATATTGAAGATGCTTGTGAAACATCACAAATGTTACCCAGAGAAAATACAGAGAGTACTTCTGTTTTGGCATTAAACGCGGAGCGGTTGGATCAACTTGAGTCATCCATATTATTTTGGGAAACTATTTCACACGATGTTCATGACACCTTCTTTCATATTCAGCCGAACATGGATTTAGATGAATCTACAAGTTGTCCTGATAGTATGCCTATATGTTGTGAGCAACTAGATGTTGAAATTCAGCCTAAGTCATCTGGAATTGACATGAATTGTGAGCCAGCTTCTACTTCTATTCCTGAACCTGAGCCCGTTGCATCAAAAGAACAACCTGCAGCAGGTACAACTGCTGTGGCTACTGGTGTTAATGATGTATTCTGGGAACAGTTCTTGACAGAGAATCCCGGTTCATCAGAAGCACAGGAGGTGCAGTCAGAAAGAAAGGATAATGATGGCAGCAAGAATGAAGGAAAAACTAGTGACCACGGTAAATTTTGGTGGAACATGCGAAATGCAAATAATCTTTCGGAACATATTGGGCATGTTAGTCAAGCAGAGAAAACTTAG 1218 0.4187 MDEGQGSSSSLPPFLAKTYEMVDDPATDSIVSWSATNRSFIVWNPPDFARDLLPRFFKHNNFSSFIRQLNTYGFKKADPEQWEFANDDFVRGQPHLMKNIHRRKPVHSHSLQNLQAQAPLTESERKSLKDDIEKLRHDKEQLLMDLQRHEQEWQMYEMQLHCSKDRLENLEHNQQKMISSVSQVLQKPGIALDLLSLTETTDRKRRLPRSGYFGDEANIEDACETSQMLPRENTESTSVLALNAERLDQLESSILFWETISHDVHDTFFHIQPNMDLDESTSCPDSMPICCEQLDVEIQPKSSGIDMNCEPASTSIPEPEPVASKEQPAAGTTAVATGVNDVFWEQFLTENPGSSEAQEVQSERKDNDGSKNEGKTSDHGKFWWNMRNANNLSEHIGHVSQAEKT* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2648 405 PRINTS Heat shock factor (HSF) domain signature 14 37 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev03g2648 405 PRINTS Heat shock factor (HSF) domain signature 65 77 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev03g2648 405 PRINTS Heat shock factor (HSF) domain signature 52 64 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev03g2648 405 Coils Coil 111 159 - -
Aev03g2648 405 SMART hsfneu3 10 103 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev03g2648 405 SUPERFAMILY "Winged helix" DNA-binding domain 9 103 IPR036390 -
Aev03g2648 405 MobiDBLite consensus disorder prediction 359 380 - -
Aev03g2648 405 Pfam HSF-type DNA-binding 14 103 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev03g2648 405 MobiDBLite consensus disorder prediction 350 383 - -
Aev03g2648 405 Gene3D - 6 104 IPR036388 -
Aev03g2648 405 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-4C 1 386 - -
Aev03g2648 405 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 1 386 IPR027725 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g2648 Aev-Chr3 26838453 26839772 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g2648 1 405 HSF AT4G18880 53.477 1.88e-130 379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Aev03g2648 HSF_DNA-bind 5.4e-31 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g2648 K09419 - gmx:100798004 642.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g2648 03 26838453 26839772 Aev04g0422 04 2688997 2690309 PCT