Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2645 ATGGCTTCGATAGCTATGTTCTCGTCGCTTCGGCGGCGCCGGTCGCCATCGCTGGAGGCGTTCCTTGTACCGGCCGACCTCACCGACGCTGCGCTCGTCTGGGTTCTCGCCGCCGTCGCCGGCGACCTCGTCAACTCCTTCTCCGATCACCATCCTTTCCCCTTCCAGCGCAAGAACTCGCGGTCCCTAATCAGAAAGGTCGAGGTTTTCCAGCTCCTATTGGAGTCTTTGAAGGATTCAAGATCGAGTCTTCCCCCCACGGCGGTGCTATGCTTGAAGGAGCTATATCTTCTTGTGTATCGTTCCAAGATTCTCCTTGATTACTGTGCGCAATCGAGTAAGTTGTGGCTATTGCTTCAGAATCACTCAATTTCAGGTCACTTCCACGATTTGGGTCAAGAATTTTCCACCCTTTTGGATGTTTTTCCCGTTAGAGGCGTTGACCTTAGCGATGATGTCAGGGAACAAGTTGAGTTGTTGAGGCAACAGTGTGGGAAGTCTAGGCTTTTTGTGGATAAGATAGATGATGCACTTAGGACGAGGTTCTTTGCGTTTCTTGATGAGTTTGAGAATGGGAGGATACCTGATTTTGATGAATTCAAGTGCTTCTATGTGGATAAGTTGAGGATTCTTGATGCTAGGAGCTTTAGGGCTGAGATTGAGGCATTGGAAGAGCAGATTGTTAATCATGAAGGTGATATTGAGCCCACTGTTTCTGTGCTTAATGGTTTGGTGGCCATGACTAGGTATTGCAGGTTTTTGTTATTTGGGTTTGAGGAAGAAGATGATGATCTTGGTTTGGGGGATGGGAATCAGAAGATGGGCAAGAAGAGGTTGATTGGTCAAGAAATTGGTGATGCATTCTTAACTGTTCCTAAGGACTTTTGCTGTCCCATTTCTTTGGATTTGATGCGGGACCCTGTGATAATTTCTACAGGGCAGACTTATGATCGGAGGTCCATATCGAGGTGGATGGAGGAAGGGCATTGTACTTGTCCAAAGACGGGGCAATTGCTCACCCACAATCGGCTTGTACCTAATCGCGCGCTTAGGAATCTGATCATGCAGTGGTGCGCTGCACATGGAATACCCTACGAACAGCCAGAGGTGATTGATCCATCGGCCGAAACATTTAATGCAGCTTGTCCCTCCAAAGCTGCCCTTGTAGCCAACAGAGCGACTGCAACACTTCTCATTCAGCAGCTAGCTAATGGGTCACAAGCTGCAAAGACTGTTGCAGCAAGGGAGATAAGATTGCTTGCAAAAACTGGAAAAGAGAACCGTGCCTTCATCGCAGAAGCGGGAGCAATACCTTACCTTCGGGACTTACTTTCATCTGCTAACACGGTTGCACAGGAGAACTCAGTAACTGCATTGCTCAACCTATCCATTTTTGACAGAAACAAAAGCAAAATCATGGATGAGGATGGTTGTTTGGGATCAATAGTTGAGGTTTTGAGATTTGGACACACAACTGAGGCAAGGGAAAATGCCGCCGCAACATTGTTCAGCCTCTCTGCTGTCCATGACTATAAAAAGAGAATAGCAGATACTGATGGAGCTGTTGAATCACTGGCAGGTATGTTGCAAGAGGGGACCCCAAGGGGAAAGAAGGATGCTGTGACAGCATTGTTCAATCTTTCCACCCACACCGAGAATTGTGCGAGAATGATAGAGGCAGGGGCAGTAACAGCTCTAATTGGGGCCTTGGGGAATGAAGGAGTTGCTGAGGAAGCAGCAGGTGCACTGGCCTTGATTGTTCGGCAGCCTATTGGGGCCAAAGCAGTTGTGAGCGAGGAAGCTGCAGTTGCTGGATTAATAGGAATGATGCGTTGTGGAACACCAAGAGGTAAAGAGAATGCGGTTGCGGCATTGCTGGAACTGTGCCGGAATGGTGGGACAGGTGCAACCGAAAGGGTGGTTAGGGCGCCTGCATTGGCCGGATTACTTCAAACTCTGCTTTTCACAGGAACAAAGCGGGCTAGACGAAAAGCAGCTTCACTTGCAAGAGTGTTTCAGAGATGTGAGAGTGCATCTCTACATTATGGTGGATTGGGTGTAGGGTATACATTTGCTAGCAATTCAGCACCAACTACGGATACAAGCTTTGCTGGTGATGTTTCAGTACCAATGTCCATTTCTGTTTCAGTACCTGTATTATAG 2163 0.4804 MASIAMFSSLRRRRSPSLEAFLVPADLTDAALVWVLAAVAGDLVNSFSDHHPFPFQRKNSRSLIRKVEVFQLLLESLKDSRSSLPPTAVLCLKELYLLVYRSKILLDYCAQSSKLWLLLQNHSISGHFHDLGQEFSTLLDVFPVRGVDLSDDVREQVELLRQQCGKSRLFVDKIDDALRTRFFAFLDEFENGRIPDFDEFKCFYVDKLRILDARSFRAEIEALEEQIVNHEGDIEPTVSVLNGLVAMTRYCRFLLFGFEEEDDDLGLGDGNQKMGKKRLIGQEIGDAFLTVPKDFCCPISLDLMRDPVIISTGQTYDRRSISRWMEEGHCTCPKTGQLLTHNRLVPNRALRNLIMQWCAAHGIPYEQPEVIDPSAETFNAACPSKAALVANRATATLLIQQLANGSQAAKTVAAREIRLLAKTGKENRAFIAEAGAIPYLRDLLSSANTVAQENSVTALLNLSIFDRNKSKIMDEDGCLGSIVEVLRFGHTTEARENAAATLFSLSAVHDYKKRIADTDGAVESLAGMLQEGTPRGKKDAVTALFNLSTHTENCARMIEAGAVTALIGALGNEGVAEEAAGALALIVRQPIGAKAVVSEEAAVAGLIGMMRCGTPRGKENAVAALLELCRNGGTGATERVVRAPALAGLLQTLLFTGTKRARRKAASLARVFQRCESASLHYGGLGVGYTFASNSAPTTDTSFAGDVSVPMSISVSVPVL* 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2645 720 SMART Ubox_2 294 357 IPR003613 GO:0004842|GO:0016567
Aev03g2645 720 PANTHER U BOX DOMAIN-CONTAINING 11 702 - -
Aev03g2645 720 SUPERFAMILY RING/U-box 280 365 - -
Aev03g2645 720 CDD RING-Ubox_PUB 295 337 IPR045210 -
Aev03g2645 720 SUPERFAMILY ARM repeat 396 672 IPR016024 -
Aev03g2645 720 Pfam Armadillo/beta-catenin-like repeat 425 463 IPR000225 GO:0005515
Aev03g2645 720 Pfam U-box domain 291 361 IPR003613 GO:0004842|GO:0016567
Aev03g2645 720 Gene3D - 561 660 IPR011989 -
Aev03g2645 720 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 290 366 IPR013083 -
Aev03g2645 720 Coils Coil 213 233 - -
Aev03g2645 720 Gene3D - 375 560 IPR011989 -
Aev03g2645 720 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 17 11 702 - -
Aev03g2645 720 ProSiteProfiles U-box domain profile. 290 364 IPR003613 GO:0004842|GO:0016567
Aev03g2645 720 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 435 477 IPR000225 GO:0005515
Aev03g2645 720 SMART arm_5 550 588 IPR000225 GO:0005515
Aev03g2645 720 SMART arm_5 424 464 IPR000225 GO:0005515
Aev03g2645 720 SMART arm_5 507 549 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g2645 Aev-Chr3 26817497 26819659 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g2645 1 720 U-box Gene Family AT1G29340 66.576 0.0 907
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g2645 - - gmx:100811153 1060.44