Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2626 ATGATTGCAGCAAGTGATGGAAGCCAAAGCAACAGAAGAAAGAAGGAATCAAGAAAGGGACATCACAAGTATGTTGGTGCTAGACAAAGGCCATCAGGGAGATGGGTGGCAGAGATCAAGGACTCTGTTCAGAAGGTTAGGCTCTGGCTTGGAACCTTTGACTCTGCTGAGGATGCAGCTCGTGCTTACGACACCGCTGCTCGAAACAATTTCGATGAGTCTCCACAATCTCCACCCTCTGCAGGTGGTGGTAGCATTAACACCAATGTGGCTGATATCATGCAGCCCCTTTCATTTGAGCTTATTGTTGGTGAAGGTGGAGATCATGGCATTGTTGGTGCACTCAAGGCCAAATTAACAGTGTTTGATCAAAAGGGTGTGAATGTGATGATGTTTCCCTCACACTCTAGTAGTTTGATGACAAGACCAACTCATCAGAGTAACTGTTCTAAGAAGAAGAAGAAGAAGAAAGTGATAACTACTACTACTAGAACTATTTCATCAAACACTTGTGCTAAGAGGAGTGTGCTTATTCCTAATAATGATCATGATCATGATCATGATAGTGTTGGAGTTAATTCAAATCCATCTTGTCAAGAAACCCCACTCTTGACAAGTGTGAGTTGTGCCAATGAAGTAGCATATGATTTGCCATGGCCTACTCAGATCAGCCAATTAGTCCCTGAAAGTTGCTTGTTTGGTTGTGTAAGTGCAGCAACATCATCATCATCTAATACATGGCCGCTTTGTGATATGACACACTCAGATCATGGGCCATCATCAAGGAGCAATAGGACTGGCCAATCATCAGCCATTGTTGGGGGCATGCAATTCCCTCTCATTGGTGGACCAACAACTCATGAACAAGGATTTTGGACATCTCAGCTCCAACAGTCTCTGCACAGGGAGAATAACAACACTTGCCTTGATTTCACTGGCTCTTGTGATCCTTTTCTCTATTTGTCCTGTGAGCTAAAGCTTGCTTTCTTGCTTGATTAG 999 0.4364 MIAASDGSQSNRRKKESRKGHHKYVGARQRPSGRWVAEIKDSVQKVRLWLGTFDSAEDAARAYDTAARNNFDESPQSPPSAGGGSINTNVADIMQPLSFELIVGEGGDHGIVGALKAKLTVFDQKGVNVMMFPSHSSSLMTRPTHQSNCSKKKKKKKVITTTTRTISSNTCAKRSVLIPNNDHDHDHDSVGVNSNPSCQETPLLTSVSCANEVAYDLPWPTQISQLVPESCLFGCVSAATSSSSNTWPLCDMTHSDHGPSSRSNRTGQSSAIVGGMQFPLIGGPTTHEQGFWTSQLQQSLHRENNNTCLDFTGSCDPFLYLSCELKLAFLLD* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2626 332 ProSiteProfiles AP2/ERF domain profile. 23 89 IPR001471 GO:0003700|GO:0006355
Aev03g2626 332 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 12 322 - -
Aev03g2626 332 CDD AP2 23 74 IPR001471 GO:0003700|GO:0006355
Aev03g2626 332 Gene3D AP2/ERF domain 22 76 IPR036955 GO:0003700|GO:0006355
Aev03g2626 332 SMART rav1_2 23 78 IPR001471 GO:0003700|GO:0006355
Aev03g2626 332 PRINTS Ethylene responsive element binding protein signature 46 62 IPR001471 GO:0003700|GO:0006355
Aev03g2626 332 PRINTS Ethylene responsive element binding protein signature 24 35 IPR001471 GO:0003700|GO:0006355
Aev03g2626 332 MobiDBLite consensus disorder prediction 68 87 - -
Aev03g2626 332 MobiDBLite consensus disorder prediction 69 87 - -
Aev03g2626 332 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR LEP 12 322 - -
Aev03g2626 332 MobiDBLite consensus disorder prediction 1 31 - -
Aev03g2626 332 Pfam AP2 domain 23 69 IPR001471 GO:0003700|GO:0006355
Aev03g2626 332 MobiDBLite consensus disorder prediction 136 156 - -
Aev03g2626 332 MobiDBLite consensus disorder prediction 14 28 - -
Aev03g2626 332 SUPERFAMILY DNA-binding domain 23 73 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g2626 Aev-Chr3 26730333 26731331 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g2626 12 67 AP2-EREBP Transcription Factor Family AT5G19790 66.667 2.10e-20 87.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Aev03g2626 AP2 5.8e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g2626 - - gmx:102667106 225.713