Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2613 ATGTCAGATGAGAATGAGGGGATGGGTGCTGGCAAGAGCAGTAGCGAGGAAGAGGAGGAGGAGGAGGAAACTAATTCGTTGGGGTCTTCTTCCCAAAAATGCTCATCATCCTTGTTTGACTTGAATGAAGAAGCTAGCAGTGAAGATATTAATACTAATAATAATAATAATGATGAGGAAAAGGGCGCATCAAAGGATGAAGAAGAAGGGACATCAAACAACAACAACAATAATAATAATAATGAAAGAAGGAGTGGAGTGAGACAATATGTAAGGTCAAAGATGCCTCGCCTTCGTTGGACTCCTGACCTTCATCACTCCTTTGTACATGCTGTTGAAAGGCTTGGTGGCCAAGAAAGAGCAACACCCAAGTTGGTGCTTCAGCTCATGAATGTGAGAGGACTCAGCATTGCTCATGTCAAGAGTCACCTCCAGATGTATCGTAGCAAGAAGCTTGATGAATGTGGGCAAGTACTAGGTCAAGCATACAGATCAAGCAATGAACTAGGTCGTTTCTCTCATCACCACAATTCCAGTATGATTAATCTTCATCAACATTTCAAGATGGGAAACGGTGGAATTATTCTAGGAAGCAATAATATTAACAACAACCACCATAATACTAGTCATCACCATTTCCATGGTCTCCTGCAGCACTCCTTATTCTCTCTTCCATATTCACATTCACATTCAAAACCCACCGACTCAAGGTACCATGAGTGGCACTTGAATGATGAAGCTTTTAGAAGAGCAAGTTACATAAGCAACGTAGTAGTTCCCTCATCAACAACAATATTAGCAGCTTCAAATAACCAGCAGCAAATTCAAGTAGTGGATACTACTGCAGCCAGCAGAATTGCACCCATGAGACCAAGCCGATTTCTTGAAGAGAAAAAGTGGCCTCCCTTGGACATTATCAATAATCATCGTCATTATTGGAAAACCAATACTAATACTAATAATAATAATATTGGATCACAATCTATTGCACATCAATTTGGCAACACTACTACCACTACTAGTGCATCATTAAGACCACTTGATTTGAGGTTTGGAGATAACACAAGAATCAGGGACGACCACTATCTATCAAACCCCGTTAATAATAAGATGAATCAAGAGATGTTGCAGAAGGAGAAGCAATGGGTGGCTGCTGATTTGCAATTGGGATTGAATCACAAAAATGAGGGCGACAATAATGATGATGATTGCAGAGAGACCCAAGAAATCAGCACAAAACTTTCTCTTTCTTAA 1254 0.4027 MSDENEGMGAGKSSSEEEEEEEETNSLGSSSQKCSSSLFDLNEEASSEDINTNNNNNDEEKGASKDEEEGTSNNNNNNNNNERRSGVRQYVRSKMPRLRWTPDLHHSFVHAVERLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDECGQVLGQAYRSSNELGRFSHHHNSSMINLHQHFKMGNGGIILGSNNINNNHHNTSHHHFHGLLQHSLFSLPYSHSHSKPTDSRYHEWHLNDEAFRRASYISNVVVPSSTTILAASNNQQQIQVVDTTAASRIAPMRPSRFLEEKKWPPLDIINNHRHYWKTNTNTNNNNIGSQSIAHQFGNTTTTTSASLRPLDLRFGDNTRIRDDHYLSNPVNNKMNQEMLQKEKQWVAADLQLGLNHKNEGDNNDDDCRETQEISTKLSLS* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2613 417 SUPERFAMILY Homeodomain-like 94 150 IPR009057 -
Aev03g2613 417 MobiDBLite consensus disorder prediction 393 417 - -
Aev03g2613 417 Gene3D - 95 152 - -
Aev03g2613 417 Pfam Myb-like DNA-binding domain 98 148 IPR001005 -
Aev03g2613 417 MobiDBLite consensus disorder prediction 395 409 - -
Aev03g2613 417 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 1 417 - -
Aev03g2613 417 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 92 152 IPR017930 -
Aev03g2613 417 MobiDBLite consensus disorder prediction 27 58 - -
Aev03g2613 417 MobiDBLite consensus disorder prediction 1 86 - -
Aev03g2613 417 MobiDBLite consensus disorder prediction 69 86 - -
Aev03g2613 417 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 96 151 IPR006447 GO:0003677
Aev03g2613 417 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 1 417 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g2613 Aev-Chr3 26652294 26655238 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g2613 29 153 G2-like Transcription Factor Family AT2G42660 58.400 7.45e-34 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Aev03g2613 Myb_DNA-binding 7.8e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g2613 - - gmx:100808625 368.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g2613 03 26652294 26655238 Aev04g0464 04 2907505 2909013 PCT