Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2594 ATGCATTTTGTACTACTAATGGGTAAGGAACATCAAGACCAAGAGGCCAAGGATGACAGGTTCAAGAAGAAGCTAAAGATGAATGGCAAGTCCAAGTTTGTTGGAGTGAGACAAAGAGCTTCTGGGAAATGGGCAGCAGAGATCAAAGACACATCAAAGAAGATTAGGATGTGGCTTGGAACTTACCAAACTGCTGAGGAAGCTGCTAGAGCCTATGATGAAGCTGCTTGCCTCCTTAGAGGTTCTAACACTAAAACCAACTTCTCTACTCATGCCATTGCTTCTGATTCTCCTATATCTCTCAAAATCAGAAGCCTACTTGATCGTAAAGCCATGTCGAACCAAATTCGAATTCCGAACCAATTCACTATGATCAGTCCTACTGTCCAAGGTGCTAAAAGTCCACAAGGTTGTGCCATTAATGACAACATGATGGCCATGGAAGACAACCCTGCATGGAGTAGTAGTGAAGGTAAGTCTTTGTTTTGGGTTCAGAGTGAAGTCTATGATAATTTGTATAGGCCAGATATGAACATGATCAACTGCTCAATGGGTCTTGTTGAACCAAATGAATATCAGCTTGATTACTCTTGGCAATTAGCACAACAAAGGATTAATGAGTTACCAATAGTACCACCACAAAATGGTCTAGATGTGGAGAGGCAGTTATCAGACTCGATTTATACCATGAATGAATGCTATGTGGAGGATGCACATGAGTACGAATATGGTGGAAATTACGCTCTCTCCCACTTGTTCTGCTTTACTTGA 771 0.415 MHFVLLMGKEHQDQEAKDDRFKKKLKMNGKSKFVGVRQRASGKWAAEIKDTSKKIRMWLGTYQTAEEAARAYDEAACLLRGSNTKTNFSTHAIASDSPISLKIRSLLDRKAMSNQIRIPNQFTMISPTVQGAKSPQGCAINDNMMAMEDNPAWSSSEGKSLFWVQSEVYDNLYRPDMNMINCSMGLVEPNEYQLDYSWQLAQQRINELPIVPPQNGLDVERQLSDSIYTMNECYVEDAHEYEYGGNYALSHLFCFT* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2594 256 PRINTS Ethylene responsive element binding protein signature 55 71 IPR001471 GO:0003700|GO:0006355
Aev03g2594 256 PRINTS Ethylene responsive element binding protein signature 33 44 IPR001471 GO:0003700|GO:0006355
Aev03g2594 256 SMART rav1_2 32 95 IPR001471 GO:0003700|GO:0006355
Aev03g2594 256 CDD AP2 31 88 IPR001471 GO:0003700|GO:0006355
Aev03g2594 256 Gene3D AP2/ERF domain 31 91 IPR036955 GO:0003700|GO:0006355
Aev03g2594 256 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERN2 12 233 - -
Aev03g2594 256 ProSiteProfiles AP2/ERF domain profile. 32 89 IPR001471 GO:0003700|GO:0006355
Aev03g2594 256 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 12 233 - -
Aev03g2594 256 SUPERFAMILY DNA-binding domain 31 90 IPR016177 GO:0003677
Aev03g2594 256 Pfam AP2 domain 31 81 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g2594 Aev-Chr3 26544317 26545087 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g2594 12 231 AP2-EREBP Transcription Factor Family AT5G19790 41.350 7.35e-41 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aev03g2594 AP2 1.2e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g2594 K09286 - gmx:100809046 285.419