Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2553 ATGGAGTGCAGCAAGAGCATCTCATCCTGGAAATACAACGTCTTTGTGAGCTTCAGAGGCGAGGACACTCGTCACAATTTCTCCGATCATCTCTTTGCTGCTTTCCAAAGAAAAGCCCTACTTGCCTTCAGGGATGACAGGAATCTCAACCACGGAGATCACATATCGACGGAGCTTATGCAAGCAATCGAAGCATCTCAGGTTCTGATCGTTGTCCTCTCTAAGAACTATGCCAACTCTTCATGGTGCTTGCAGGAACTCGCAAAGATTGTTGACTGCATGAACAGGGAAGTACTGGCAGGTCAACCCCAACTTGTGCTGCCTGTTTTTTATGATGTGAGTCCATCAGAGGTGCGAAAACAGAGTGGGGATTTTTATGGGAAAGCCTTTGCAGAGCATGAAGAAAGATTTAAACATGATTTGGGGATGGTGAATCGATGGAGGGAAGCTCTTGTGCAAGTGGCCAATCTCTCTGGTTCGGATGTACACAACAAGCCACAGAATAAAGAGATTGAAAACATTGTTGATAGAGTTTTGAACATATGTTACAAATTACCAAGTTTGGATGGTCTAGTCGGAATTCGTTCTCGTGTAGAACAGCTTGAAAAATTTTTGGACTTGGACTCCACAGATGATATTCGAGTTGTAGGCATTATTGGGATGGGTGGTATAGGAAAGACAACTCTTGCTCGAGCTTTGTATGATAGAAACCTTCATCGATATGGTGCTACTTGCTTTATCGATGACACGAGTAAAGTTTACCGTGATTGTGGTCCAATTGGTGTACAAAAGCAACTTATTTGTCAAACTAAAATTGAAGAAATCCAGGAGACATGGAATCTATCCAAGGCATCCTATCTGATAAAAACTAGGTTGCGCAGTGTGAAGGCCTTTATCATTCTTGATAATGTTGACAAGGTTGAACAGCTGGAGAGTTTAAGCATGGATCGTGAATGTCTATGTGCAGGAAGTAGAATCATCATAATTTCTAGAGATCGACATATCTTAAATAATTATGGGGTGGATGAAATTTACCATGCTCAACTCTTGAACGAGGATGATGCTCGTCAGTTGTTTTGTAAAATAGCTTTTAAACATGATTATATCATGGGTCGTGATGATATTAGCAGAGAGTATAAAGTGTTGACAGAACTGACACTAATATATGCTCAAGGTCTTCCATTAGCAATAAAGGTTTTGGGATCATTTCTAAATGGCAAAACTATTACTGAGTGGCAGAGTGCCTTGGATAGATTAAGAGATATTCCAAATAAAGATATTATGGATGTACTTCAAATTAGTTTTGATGGATTGGAACCTAAGGAAAAAGAAATATTTTTGGATATTGCCTGTTTCTACAACTACAAAGACAAAAATGAGGCGAAAAAAATTCTAGAGTATTGTGGATTTCATCCCGAGATTGGAATCAGAGTTCTTATTGATAAATCACTTATAACAGTTGATTATATGGGTCTAATTAGAATGCATGACATGCTGAAAGAGCTGGGCAAGAAAATTGTTCAACAAGATGCACCAAATGAGCCTTGGAAGTGGAGTAGAATATGGTTTTATGAGGATTTCTGCAGTATAATGACTAAAAACACGGAGATGAATAACCTTGAAGCAATAAACCTACGATGGATTCCTAGAGACATAACGTTGAGGGCAGGAGCATTATCGAAAATGAATCGACTTCGATCGCTCATACTCTCCGGTGGGAATTTCTCAGGAATTCTCGATTACCTTTCAAGCAATTTGCGATATCTTGAATGGAAAAACTATCCCTTCACTTACTTTCCATCAAATTGTGAACTAACCAAACTTGTTGTGTTGCACTTACATCGTAGCAACATCAAGCAACTATGGGAAGGTACAAAGCTTTTGGTTAATTTGAAAATTATGGATCTTCGTCACTCTAAAAGTCTTGTCAAGACCCCAGACTTCAGCGGAACCCCATATCTTGAGGTGCTAATCCTTGAAGGATGTACAAAACTTGCACATATTCATCCATCAATTGGAATTCTAATAAAGCTTGTCTGCTTAGATTTGACAAATTGCACAAGTTTAAGGTGTCTCCCCGACAGCATAGGTGATGTAATTTCACTTGAATTTGTACATCTAGAAGGTTGTTCAAGATTATTTCGCAGAAAACGAGCAAAGAAAGCAAGTCATGGCACACGTGACATTGCTGTCCAATGTCAGTCAAAATCCTCCATGTTTAAGCTTAAGTTGCCTTTCCAGCGCTTTAATTCTAGAAGCCAAAATGATATTGGTGTTCCTCTGATGTCTTCTTTGTCTCGACTCGGTTGCTTGAAAGAGCTTGATCTAGGCTATTGCAATCTGCTTAATATCCCTGATGCCATGGTGTCACTAGGTTGTTTAGAAAGACTATTGTTGAGGGGAAACAATTTTGTTACACTGCCTTGTGTCATAAAGGACCTTCCCAGCCTCATATATTTAAATCTAGAACATTGCAAACAACTGAGATCTTTGTATGAGTTCCCATTACATGTGAACTTGCCGGAACGAAGAGGACTTATTTGTAGGGATCAAGACGCAGGATTAAGTATTTTTGGCTGCCCCAAATTGGCTGAGATGGAAAACTGGAGTACTATTGCTCTTTCATGGATGATACAATTCCTCAAGTTCCACGAGGAAAATTCTCCTCCCGTTACCATAGTTGTTCCTGGAACTCAAGTCCCGTCGTGGTTCAACAGTCAGTGTGTGGGTGATTCAATCACAATAGAGCCATTCCCGAATTTCAGCGACAGCAGTTGGATTGGCCTTGCTTTCTGTGCAGCATTTGTTGCACACTATGACCAATCTAGTTCAAGTGATGCAAGAAGATCCTCTGTTGTGTACGCGTTTGGCAACCTGTCTAATTTTCTCACTTGTAGCTGA 2901 0.3995 MECSKSISSWKYNVFVSFRGEDTRHNFSDHLFAAFQRKALLAFRDDRNLNHGDHISTELMQAIEASQVLIVVLSKNYANSSWCLQELAKIVDCMNREVLAGQPQLVLPVFYDVSPSEVRKQSGDFYGKAFAEHEERFKHDLGMVNRWREALVQVANLSGSDVHNKPQNKEIENIVDRVLNICYKLPSLDGLVGIRSRVEQLEKFLDLDSTDDIRVVGIIGMGGIGKTTLARALYDRNLHRYGATCFIDDTSKVYRDCGPIGVQKQLICQTKIEEIQETWNLSKASYLIKTRLRSVKAFIILDNVDKVEQLESLSMDRECLCAGSRIIIISRDRHILNNYGVDEIYHAQLLNEDDARQLFCKIAFKHDYIMGRDDISREYKVLTELTLIYAQGLPLAIKVLGSFLNGKTITEWQSALDRLRDIPNKDIMDVLQISFDGLEPKEKEIFLDIACFYNYKDKNEAKKILEYCGFHPEIGIRVLIDKSLITVDYMGLIRMHDMLKELGKKIVQQDAPNEPWKWSRIWFYEDFCSIMTKNTEMNNLEAINLRWIPRDITLRAGALSKMNRLRSLILSGGNFSGILDYLSSNLRYLEWKNYPFTYFPSNCELTKLVVLHLHRSNIKQLWEGTKLLVNLKIMDLRHSKSLVKTPDFSGTPYLEVLILEGCTKLAHIHPSIGILIKLVCLDLTNCTSLRCLPDSIGDVISLEFVHLEGCSRLFRRKRAKKASHGTRDIAVQCQSKSSMFKLKLPFQRFNSRSQNDIGVPLMSSLSRLGCLKELDLGYCNLLNIPDAMVSLGCLERLLLRGNNFVTLPCVIKDLPSLIYLNLEHCKQLRSLYEFPLHVNLPERRGLICRDQDAGLSIFGCPKLAEMENWSTIALSWMIQFLKFHEENSPPVTIVVPGTQVPSWFNSQCVGDSITIEPFPNFSDSSWIGLAFCAAFVAHYDQSSSSDARRSSVVYAFGNLSNFLTCS* 967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2553 966 PRINTS Disease resistance protein signature 291 305 - -
Aev03g2553 966 PRINTS Disease resistance protein signature 215 230 - -
Aev03g2553 966 PRINTS Disease resistance protein signature 390 404 - -
Aev03g2553 966 PRINTS Disease resistance protein signature 812 828 - -
Aev03g2553 966 Pfam C-JID domain 895 938 IPR045344 -
Aev03g2553 966 Gene3D - 185 344 IPR027417 -
Aev03g2553 966 SUPERFAMILY "Winged helix" DNA-binding domain 426 530 IPR036390 -
Aev03g2553 966 Pfam TIR domain 11 178 IPR000157 GO:0007165
Aev03g2553 966 SUPERFAMILY L domain-like 556 843 - -
Aev03g2553 966 Gene3D - 6 184 IPR035897 -
Aev03g2553 966 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 173 449 IPR027417 -
Aev03g2553 966 SMART till_3 11 157 IPR000157 GO:0007165
Aev03g2553 966 Pfam Leucine Rich Repeat 607 626 IPR011713 -
Aev03g2553 966 ProSiteProfiles TIR domain profile. 10 182 IPR000157 GO:0007165
Aev03g2553 966 Gene3D - 349 439 IPR042197 -
Aev03g2553 966 Pfam NB-ARC domain 197 422 IPR002182 GO:0043531
Aev03g2553 966 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 181 926 IPR044974 GO:0006952
Aev03g2553 966 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 181 926 - -
Aev03g2553 966 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 159 IPR035897 -
Aev03g2553 966 Gene3D Ribonuclease Inhibitor 735 877 IPR032675 -
Aev03g2553 966 Gene3D Ribonuclease Inhibitor 523 727 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g2553 Aev-Chr3 26275988 26279447 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g2553 192 709 WRKY Transcription Factor Family AT5G45050 31.810 2.10e-67 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g2553 - - ahf:112792657 941.028