Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2548 ATGGACGGAGCGCCGCCGTCTTCAGCCGCGGGAGCCGGCGGAACAGGAGGAGGTCCGGCGCCGTTCCTGATGAAGACGTACGACATGGTGGACGATTCTGCGACTGACGACATCGTTTCTTGGAGCTCCACCAACAACAGCTTCGTCGTTTGGAACCCGCCGGAGTTCGCTCGCCTCCTTCTACCTACATATTTCAAGCACAACAACTTCTCAAGCTTCATCCGCCAGCTTAATACCTATGGATTTCGAAAAATACATCCTGAGCGGTGGGAGTTCGCTAACGATGATTTCATCAAAGACCAAAAGCATCTTCTTAAGAATATTCACCGCAGGAAACCCATCCACAGTCATAGTCATCCTCCGGGTGCTCTTGTGGATCAAGAAAGAGCAACATTGGAGGAAGAAATTGAGAAACTATCACGTGAGAAGTCTACTGTTGAATCCAATATTTTCCGCTACAAACAGCATCAATCAACAGCAAAGGTTCAGCTGGAAGATTTTCAGCAGCGATTAGATGATATGGAGAAGAGGCAGAAACATTTGATGAACTTTTTCGAGAAGGCTCTTCAGAATCCTACTTTTGTTGAGCAGCTTTCCCGGAAAATTGAATCCATGGATTTGTCAGCATATCATAAGAAAAGACGATTGCCTCAGGCAGAGAACTTGCACCACGGTGCTGAAAGTAGTTTAGTTGACAACCATAGCAATTTCAGAGTGGACTTTGGGAATGTTTTCCATCAAGATTTCTCGAATAAGCTCAGACTGGAACTGTCACCAGCTGTTTCAGATATGAACTTAGTGTCACGTAGCACACAGAGTTCATATGAAGATGGAGAAAGCCCACAGAAGATGCAATCTGAAGGAGAACCGAAAGGAGCCCAGACGAGAACAGCTGTTGCATTTGCACCTGAAACATTAGAGCTTTCAGATACTGGAGCATCTTTTACATTTAAGATGGATTCATGTTTACCACAAAGAGCAACCACTGGTGACAGCCCAAAACTGCACTCTTTGGAGCCGAGTAGCGAAGAAGGTGATAGCCATATATCCTGCCAACTTACGCTGGCATCTTGCCCATTGCAAGTCAACAGGAACTCATACTCAGCTCGATCACCCCAAATAGACTGCCAAGAAATTGGCAAATTGGCAGAGTCAAGGTTTCATGCCAATGGTAAAGAATCTGACAGTGGAGCCATCTCAAACCGAAACCAATCTAACGAGGCTACCAATTTAGCTTCCTCACTGGAGACCCCAAGTAACAATCGAGCTACCCCAGCTGCTCAAAATAGGGTGAATGACGTGTTCTGGGAACAATTCCTTACTGAAAGACCAGGCTGTTCAGACAATGAAGAGGCAATATCCAACTACAGAGCGAACCCATACGACGAGCAAGATGAAGGGCGGCCGGCTCATGGAATGGCGAGAAACGTTAAGAACATGGATCAGCTCACACTTTAA 1458 0.4623 MDGAPPSSAAGAGGTGGGPAPFLMKTYDMVDDSATDDIVSWSSTNNSFVVWNPPEFARLLLPTYFKHNNFSSFIRQLNTYGFRKIHPERWEFANDDFIKDQKHLLKNIHRRKPIHSHSHPPGALVDQERATLEEEIEKLSREKSTVESNIFRYKQHQSTAKVQLEDFQQRLDDMEKRQKHLMNFFEKALQNPTFVEQLSRKIESMDLSAYHKKRRLPQAENLHHGAESSLVDNHSNFRVDFGNVFHQDFSNKLRLELSPAVSDMNLVSRSTQSSYEDGESPQKMQSEGEPKGAQTRTAVAFAPETLELSDTGASFTFKMDSCLPQRATTGDSPKLHSLEPSSEEGDSHISCQLTLASCPLQVNRNSYSARSPQIDCQEIGKLAESRFHANGKESDSGAISNRNQSNEATNLASSLETPSNNRATPAAQNRVNDVFWEQFLTERPGCSDNEEAISNYRANPYDEQDEGRPAHGMARNVKNMDQLTL* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2548 485 PRINTS Heat shock factor (HSF) domain signature 60 72 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev03g2548 485 PRINTS Heat shock factor (HSF) domain signature 22 45 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev03g2548 485 PRINTS Heat shock factor (HSF) domain signature 73 85 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev03g2548 485 Pfam HSF-type DNA-binding 22 111 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev03g2548 485 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 14 481 IPR027725 -
Aev03g2548 485 Coils Coil 122 149 - -
Aev03g2548 485 MobiDBLite consensus disorder prediction 460 485 - -
Aev03g2548 485 SMART hsfneu3 18 111 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev03g2548 485 Gene3D - 17 112 IPR036388 -
Aev03g2548 485 MobiDBLite consensus disorder prediction 268 295 - -
Aev03g2548 485 MobiDBLite consensus disorder prediction 268 292 - -
Aev03g2548 485 ProSitePatterns HSF-type DNA-binding domain signature. 61 85 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev03g2548 485 SUPERFAMILY "Winged helix" DNA-binding domain 18 111 IPR036390 -
Aev03g2548 485 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-5 14 481 - -
Aev03g2548 485 Coils Coil 157 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g2548 Aev-Chr3 26244765 26247454 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g2548 1 485 HSF AT4G13980 54.435 1.75e-170 486
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Aev03g2548 HSF_DNA-bind 1.7e-31 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g2548 K09419 - gmx:100786408 786.949