Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2541 ATGGCTCATCTCACAACCCTACCTTTTCTCTCTACTCTCACACTCTTCCTCTTCTTCACCGCCGTCATCGCCGATGACGCCGCCGTCATGTCGAAGCTTCTCAAATCCCTTTCGCCGCCTCCCTCCGACTGGTCCTCCTCCACGCCATACTGCAAATGGACCGGCATCAAGTGTGACTCCTCAAACCGCGTGACCTTCATAAGCCTCGCATCGTCGTCCCTCACCGGAACGCTCCCTTCCGATCTCAACACCCTCTCCCAACTCTCCTTCCTCTCCCTCCAACAAAACTCCCTCGCCGGTCCACTCCCTTCCCTCGCTAACCTCTCTAACCTTCAAACCGCGTTCCTTGGCCGCAACAACTTCACATCCGTACCTTCCGGCGCATTTTCTGGCCTCAACAGCCTCCAGACCCTTAGCATCTACGATAACCCTTCCATCTCACCATGGACCTTCCCCTCCGAGTTGACTCAGTCCTCAAGCCTCAACGACCTCGATTTTGGAACCGCCGGAATCACTGGCGAGTTGCCGGACATCTTCGACTCGTTCCCTAGTCTCCAGAATCTCCGCCTCTCCTACAACAATCTCACCGGAGCATTACCCAAGTCTCTCGCTTCTTCTTCGATCACGCACCTTTGGCTCAACAACCAGGAGAGCGGTTTATCGGGCACGATTGAGGTTTTATCGAAGATGACGCAGTTGGCTCAGGTGTGGCTCCACAAGAACCAGTTCACCGGCCGGATTCCCGATTTGTCACAATGCGATAACCTTTTCGATTTACAGCTTAGGGATAACCAGTTAACCGGGTTGGTTCCAAGCTCATTGACAGGGCTATCGAGCTTGAAGAATGTTTCGCTGGATAACAATGATTTGCAGGGTCCGATGCCGGTGTTCGGTAAGGGTGTGAAGGTTACGCTTGATGGGATCAATAGCTTTTGCAGGAATGATCCGGGGCCTTGTGATGGGAGGGTGATGGTGTTGCTCCAAATTGCTGAGGGTTTCGAGTATCCGATTCGGCTGGCGGAATCGTGGAAAGGGAATGAACCTTGCCAGGGTTGGAGTTTTGTGGTGTGCAGTTCAGGGGGGAAGATTACTACTTTGAATTTTGGGAAGCAGGGTTTACAGGGTACTATTTCACCTGCATTTGGTAATTTGACTGATTTGAGGAGCTTGTATCTTAATGGGAACAATTTGACTGGTTCTATACCTGAGAGCTTGACTACTTTGCCACAACTTGAGACTTTTGATGTGTCTGATAACAACTTGTCTGGTGAGGTTCCCAAGTTTCCATCAAGGGTGAAGCTAAATACGGCTGGTAATGCTTTGATTGGGAAAAATCCTGGTTCTGGTGGAAGAGGAGGGAGTGGAACTAGTCCTTCTGAGGGGTCTGCGCCGGGTGGAAGTCCTGTTGAATCGAAAAATGGCAGTTCATTGTCGAAGGGGGTGATTGCTGGTATAGTGATTATTGCTTTGCTTTTTGTTGCTGTGGTGTTGTTTGTGTCTTGCAAGTGTTATGCCAGGAATCGGCAGCAGAAGTTTGGAAGGGTTGGTAATCCTGAAGATGGAAAAGGGAACTCCAGAATTGATGCGATGAGTGTTTCCAATGGATATGGTGCTGTGCCGAGTGAGTTGCAGAGCCAAAGTAGTGGTGACAGGAGTGATCTTCATGATTTTGATGGTGGAAATGCTACGATTTCAATCCATATTCTTCGACAGGTAACCAATAATTTCAGTGAAAAGAACATTTTAGGTAGGGGAGGATTTGGAGTTGTTTACAAAGGGGAGTTGCCTGATGGAACTAAAATTGCTGTCAAGAGGATGGAATCTGTTGCGATGGGAAGCAAAGGAATGAAAGAATTTCAAGCAGAGATTGCGGTTCTTTCTAAAGTTAGGCATAGACATTTGGTTGCTCTTTTAGGATATTGCATCAATGGCAATGAGAGGATTTTGGTGTATGAGTACATGCCTCAAGGATCATTAACACAACATCTCTTTGAATGGCGTGAACTTGGGTATGCTCCTTTGATATGGAAACAAAGGGTGACAATAGCTTTGGATGTGGCACGGGGAGTGGAATACTTGCACAGTTTAGCTCAGCAGAGCTTCATTCACAGAGATTTAAAACCTTCAAACATACTATTAGGTGATGACATGAGAGCAAAAGTTGCAGATTTTGGGTTGGTTCGAAATGCACCAGATGGGAAGTATTCTGTTGAGACGCGGTTGGCTGGAACTTTTGGTTATCTTGCACCTGAGTATGCTGCTACTGGAAGAGTGACAACCAAAGTGGATGTTTACGCATTTGGAGTAGTTTTGATGGAATTGATCACCGGTAGAAGGGCATTGGATGATACTATGCCTGATGAAAAGGCTCACCTGGTGACGTGGTTCCGTAGGGTACTAATCAACAAGGACAACATCCCAAAGGCAATTGATCAAATGCTCGATCCTAGTGAGGAAACTATGGAGAGCATATATAAAGTGGCTGAGCTGGCAGGCCACTGCACTGCTCGCGAACCATACCAAAGGCCAGATATGGGGCACGCGGTGAATGTCTTGGCTCCTCTAGTAGAGCTATGGAAACCTACTACCCATGAAGAAGCAGACAACTCTGACATTGACCTTCAGATGAGTCTTCCTCAAGCTCTGCAAAGATGGCAAGCCAATGAAGGCACTTCCACAACCTTCAATGATATGTCCTTCTCCCAAACCCAATCAAGCATCCCCTCTAAACCTTCAGGATTTGCAGACTCCTTTGATTCAATGGATTGCCGGTGA 2775 0.4778 MAHLTTLPFLSTLTLFLFFTAVIADDAAVMSKLLKSLSPPPSDWSSSTPYCKWTGIKCDSSNRVTFISLASSSLTGTLPSDLNTLSQLSFLSLQQNSLAGPLPSLANLSNLQTAFLGRNNFTSVPSGAFSGLNSLQTLSIYDNPSISPWTFPSELTQSSSLNDLDFGTAGITGELPDIFDSFPSLQNLRLSYNNLTGALPKSLASSSITHLWLNNQESGLSGTIEVLSKMTQLAQVWLHKNQFTGRIPDLSQCDNLFDLQLRDNQLTGLVPSSLTGLSSLKNVSLDNNDLQGPMPVFGKGVKVTLDGINSFCRNDPGPCDGRVMVLLQIAEGFEYPIRLAESWKGNEPCQGWSFVVCSSGGKITTLNFGKQGLQGTISPAFGNLTDLRSLYLNGNNLTGSIPESLTTLPQLETFDVSDNNLSGEVPKFPSRVKLNTAGNALIGKNPGSGGRGGSGTSPSEGSAPGGSPVESKNGSSLSKGVIAGIVIIALLFVAVVLFVSCKCYARNRQQKFGRVGNPEDGKGNSRIDAMSVSNGYGAVPSELQSQSSGDRSDLHDFDGGNATISIHILRQVTNNFSEKNILGRGGFGVVYKGELPDGTKIAVKRMESVAMGSKGMKEFQAEIAVLSKVRHRHLVALLGYCINGNERILVYEYMPQGSLTQHLFEWRELGYAPLIWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILLGDDMRAKVADFGLVRNAPDGKYSVETRLAGTFGYLAPEYAATGRVTTKVDVYAFGVVLMELITGRRALDDTMPDEKAHLVTWFRRVLINKDNIPKAIDQMLDPSEETMESIYKVAELAGHCTAREPYQRPDMGHAVNVLAPLVELWKPTTHEEADNSDIDLQMSLPQALQRWQANEGTSTTFNDMSFSQTQSSIPSKPSGFADSFDSMDCR* 925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2541 924 PANTHER OSJNBA0070M12.3 PROTEIN 9 924 - -
Aev03g2541 924 Gene3D Phosphorylase Kinase; domain 1 539 653 - -
Aev03g2541 924 Pfam Leucine rich repeat 365 421 IPR001611 GO:0005515
Aev03g2541 924 MobiDBLite consensus disorder prediction 893 913 - -
Aev03g2541 924 Gene3D Ribonuclease Inhibitor 25 316 IPR032675 -
Aev03g2541 924 Pfam Protein tyrosine and serine/threonine kinase 579 847 IPR001245 GO:0004672|GO:0006468
Aev03g2541 924 SUPERFAMILY L domain-like 23 434 - -
Aev03g2541 924 SMART serkin_6 576 856 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev03g2541 924 ProSitePatterns Serine/Threonine protein kinases active-site signature. 701 713 IPR008271 GO:0004672|GO:0006468
Aev03g2541 924 CDD STKc_IRAK 582 855 - -
Aev03g2541 924 PANTHER RECEPTOR PROTEIN KINASE TMK1-RELATED 9 924 - -
Aev03g2541 924 SMART LRR_typ_2 108 131 IPR003591 -
Aev03g2541 924 SMART LRR_typ_2 182 205 IPR003591 -
Aev03g2541 924 SMART LRR_typ_2 384 408 IPR003591 -
Aev03g2541 924 Gene3D Ribonuclease Inhibitor 321 446 IPR032675 -
Aev03g2541 924 MobiDBLite consensus disorder prediction 450 474 - -
Aev03g2541 924 MobiDBLite consensus disorder prediction 438 474 - -
Aev03g2541 924 ProSiteProfiles Protein kinase domain profile. 576 856 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev03g2541 924 ProSitePatterns Protein kinases ATP-binding region signature. 582 604 IPR017441 GO:0005524
Aev03g2541 924 MobiDBLite consensus disorder prediction 893 924 - -
Aev03g2541 924 SUPERFAMILY Protein kinase-like (PK-like) 564 872 IPR011009 -
Aev03g2541 924 Gene3D Transferase(Phosphotransferase) domain 1 654 878 - -
Aev03g2541 924 Pfam Leucine rich repeat N-terminal domain 25 59 IPR013210 -
Aev03g2541 924 Pfam Leucine rich repeat N-terminal domain 325 358 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g2541 Aev-Chr3 26211513 26214963 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g2541 67 867 Receptor kinase-like Gene Family AT1G55610 31.920 8.20e-97 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Aev03g2541 PK_Tyr_Ser-Thr 2.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g2541 - - gmx:100286794 1328.15