Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2530 ATGGATGACGATTTTGAGTTCCCAGCTGCCGGCAACAACTTCGATGAGGACATGGGGATCCCCGAGGGTGAGGAAGACGACGCCGTGAGCCCTGTCCTCAAGGTTGGAGAAGAGAAGGAGATTGGGAAGAGTGGACTCAAGAAGAAACTCCTCAAGGAAGGTGAAAGCTGGGAAACCCCTGCCAAAGGAGACGAAGTTGAAGTGCATTACACTGGAACATTGCTCGATGGTACCAAATTTGATTCTAGCCGCGACAGGGGCACCCCTTTCAAGTTCAAGCTTGGCCAAGGACAAGTGATCAAGGGATGGGATGAAGGTATCAAAACCATGAAGAAGGGTGAAAATGCTGTTTTCACCATTCCCCCTGAAATGGCTTATGGGGAATCTGGTTCTCCACCCACCATTCCTCCAAATGCAACTCTACAGTTCGATGTGGAGTTGCTGTCTTGGACCAGTGTCAAGGACATTTGCAAGGATGGAGGAATATTCAAGAAGATTGTCACTGAAGGGGAGAAATGGGACAATCCTAAGGACCTTGATGAAGTGCTTGTTAAGTATGAGGCTAGGCTTGAAGATGGGACAGTCATCTCAAAATCTGATGGTGTGGAGTTCACCGTGGAAGAAGGATATTTCTGTCCTGCTTTAGCTAAGGCTGTGAAAACTATGAAGAAGGGAGAGAGAGTCATCTTGACCGTGAAGCCACAATATGCCTTTGGTGAGAGTGGAAGGTCAGCATCTGGAGATGAAGGAGCTGTACCTCCAAATGCTTCACTACAAATAGATCTTGAGCTAGTTTCTTGGAAGACTGTGTCTGACATCACCAAGGATAGGAAGGTTCTCAAGAAGACTTTGAAGGAGGGAGAGGGATATGAACGACCCAATGATGGAGCTGTTGTTCAAGTGAAACTTCTTGGCAAGCTGCAAGATGGGACTGTCTTTATCAAGAAGGGTCATGATGATGAACAGCCATTTGAGTTCAAAATTGATGAAGAGCAAGTAATTGATGGACTTGATAAAGCTGTGAAGGACATGAAGAAAGGGGAAATTGCATTGATGACCATACAGCCTGAATATGCCTTTGGTTCAACTGGGTCATCTCAAGAATTAGCCACCGTCCCTCCCAACTCCACCGTGTACTATGAAGTGGAGCTTGTTTCCTTTGTAAAGGAAAAGGAATCGTGGGATCTGAACACACCAGAGAAGATTGAGGCAGCAGGAAAGAAAAAAGAAGAAGGGAATGCATTGTTCAAGGCTGGTAAATACGAAAGAGCTTCAAAGAGATATGAAAAGGCTATAAGGTATATTGAGTATGATTCCTCCTTCAGTGACGAGGAGAAACAGAAGGCAAAGGTGTTGAAAATCACATGCAACCTTAACAATGCAGCCTGTAAGTTGAAACTCAAGGACTACAAACAGGCAGAGAAGTTGTGCACCAAGGTATTAGAGCTTGATAGTAGGAATGTAAAGGCACTGTACCGAAGGGCACAAGCATATATTCAACTTGTGGACTTGGACCTGGCTGAGATGGACATTAAGAAAGCTCTTGAGATTGATCCTGACAATAGGGATGTGAAGATTGAGTACAAAATATTGAAGGATAAAGTGAGAGAATACAACAAGAAGGATGCACAGTTTTACGGCAGCATATTTGCGAAAATGAACAAAGTGGAACATGCAAAAACTGCATCAGCAAAACAGGAGCCAGTCCCGATGACAATTGACAGCAAAGCTTAA 1734 0.4458 MDDDFEFPAAGNNFDEDMGIPEGEEDDAVSPVLKVGEEKEIGKSGLKKKLLKEGESWETPAKGDEVEVHYTGTLLDGTKFDSSRDRGTPFKFKLGQGQVIKGWDEGIKTMKKGENAVFTIPPEMAYGESGSPPTIPPNATLQFDVELLSWTSVKDICKDGGIFKKIVTEGEKWDNPKDLDEVLVKYEARLEDGTVISKSDGVEFTVEEGYFCPALAKAVKTMKKGERVILTVKPQYAFGESGRSASGDEGAVPPNASLQIDLELVSWKTVSDITKDRKVLKKTLKEGEGYERPNDGAVVQVKLLGKLQDGTVFIKKGHDDEQPFEFKIDEEQVIDGLDKAVKDMKKGEIALMTIQPEYAFGSTGSSQELATVPPNSTVYYEVELVSFVKEKESWDLNTPEKIEAAGKKKEEGNALFKAGKYERASKRYEKAIRYIEYDSSFSDEEKQKAKVLKITCNLNNAACKLKLKDYKQAEKLCTKVLELDSRNVKALYRRAQAYIQLVDLDLAEMDIKKALEIDPDNRDVKIEYKILKDKVREYNKKDAQFYGSIFAKMNKVEHAKTASAKQEPVPMTIDSKA* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2530 577 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 63 151 IPR001179 GO:0003755
Aev03g2530 577 SUPERFAMILY FKBP-like 270 405 - -
Aev03g2530 577 Pfam Tetratricopeptide repeat 488 521 IPR001440 GO:0005515
Aev03g2530 577 Gene3D - 269 390 IPR046357 GO:0003755
Aev03g2530 577 PANTHER PEPTIDYLPROLYL ISOMERASE 15 275 - -
Aev03g2530 577 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 58 148 IPR001179 GO:0003755
Aev03g2530 577 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 290 385 IPR001179 GO:0003755
Aev03g2530 577 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 176 265 IPR001179 GO:0003755
Aev03g2530 577 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 278 387 - -
Aev03g2530 577 Coils Coil 521 541 - -
Aev03g2530 577 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 388 559 - -
Aev03g2530 577 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 15 275 - -
Aev03g2530 577 SUPERFAMILY FKBP-like 21 160 - -
Aev03g2530 577 Gene3D Tetratricopeptide repeat domain 391 548 IPR011990 GO:0005515
Aev03g2530 577 ProSiteProfiles TPR repeat profile. 488 521 IPR019734 GO:0005515
Aev03g2530 577 MobiDBLite consensus disorder prediction 1 36 - -
Aev03g2530 577 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 179 268 IPR001179 GO:0003755
Aev03g2530 577 SMART tpr_5 405 438 IPR019734 GO:0005515
Aev03g2530 577 SMART tpr_5 454 487 IPR019734 GO:0005515
Aev03g2530 577 SMART tpr_5 488 521 IPR019734 GO:0005515
Aev03g2530 577 PANTHER PEPTIDYLPROLYL ISOMERASE 278 387 - -
Aev03g2530 577 PANTHER PEPTIDYLPROLYL ISOMERASE 388 559 - -
Aev03g2530 577 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 296 388 IPR001179 GO:0003755
Aev03g2530 577 Gene3D - 39 153 IPR046357 GO:0003755
Aev03g2530 577 SUPERFAMILY TPR-like 400 553 IPR011990 GO:0005515
Aev03g2530 577 SUPERFAMILY FKBP-like 155 271 - -
Aev03g2530 577 Gene3D - 154 268 IPR046357 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g2530 Aev-Chr3 26142700 26145593 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g2530 1 577 Calmodulin-binding Proteins AT5G48570 73.720 0.0 869
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g2530 K09571 - gmx:100819747 992.26