Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2510 ATGGAGTGGAATGCAAAATCTCCCTCGCAGTGGGACTGGGAGCACCTATTTTTCTGCAACGGAAAAGCAACAGAAAATCCCAAGTTACAACCACCACACTGGAGTGATGAAGCAAATGGAGAAACCAATGTTGGCTTGTTGGATACATCTGGGGGCAGTGGTTGTTCTGAGTCTGAGCTGATACATGCTTCTTCATCAAGGAGCTCAAAATCGGCTTCCATCAATTCATCATCAAATAGGGATAGCAAGACATCTGTATTCACTTTTGAAAGTTCCCAAGATGATTCCAGTGGTAAAAAAGAATTGTCCAAAGAAGAGCCAGTTGAAAATTCTCATGTGCCAGAGCCCTCCTCTGTATCTGGCGAACCTTTGCTGACTTTAAAGCTAGGTAAACGGTTGTACTTTGAGGATGCTTGCCCAGGAAGTGGTTCCAAAAACCTATCTTCCTCTGGGGCTCCTGTGTCATCCTTGAGTTCTGGAAAGAAGAGTAAGTCCAATGGTCAGAACATACAAAATCCGCGCTGCCAGGTTGAAGGCTGTGGCCTTGACCTTTCATCAGCTAAAGATTACCATCGCAAACACAGAGTTTGTGAAAGTCATTCCAAATCCCCTAGGGTGGTTATTTCTGGTTTGGAACGTCGATTTTGCCAGCAATGTAGCAGGTTCCATGCTCTGTCAGAGTTTGATGAGAAAAAGAGAAGCTGCAGAAGACGTCTTTCAGATCACAATGCAAGGCGCCGTAAACCTCATCCTCAAGCAGTTCAATTAAATCAATCAGCTTTGTCTTCATCACCTTATGTTGGGAGGCAACAAATGAGTCCCTTCCCTTATTCAAGGACAGCTCCAACTTTAACCTGGCAAGACTTGCGCTCCAACAAGCTCCCTCATACAAAAGATTTTCTCATGAAGCCTGTGAAAGCCAACGACGAGATGCCTAGTATCGTCACTATGCTTTCTGGTGATTCCAACGCCTGTCTTACATCCAAAGGCGTTGCGACAAAGAGTATCAATCCAGGTCGTTTTCCATCTTTATTAACAACCAAGCTTCATGATTTACCATTAAACTTAGATTCTTTATTTGCTAATTCATTCTCAAAGCATTTAACATTTGCCCCAACACTATTATTCATCTGGTGGATTGCCTGGTTTTCAGGTGTGGAGGATTCCATAACCTCCTCTGATCCGAATGCTGCACAAGATTTTCACCGTGCTCTCTCTCTTCTGTCAACCAACTCATGGGGCTCATACGAGACTACAAAGTCCATGTCTATAGAACACTCCAATCACACCACTCAGCCAATGATGACTCACGCAGCGAACCAACAGCGCTTCCCTTTTGCTGCTTCAATGGAATACTGGCATACCGATCAACAGCCAGTGAATCCCACCACGTGGATCGCTGCCACCACGTACCCAAATTGTGATGACAGCAATCGGTTCCACGAATTTCAGCTGTTCAGAGAGCCTTATGAGTCTGGTTTCCCATACGACCAGTTGGACTAA 1503 0.4484 MEWNAKSPSQWDWEHLFFCNGKATENPKLQPPHWSDEANGETNVGLLDTSGGSGCSESELIHASSSRSSKSASINSSSNRDSKTSVFTFESSQDDSSGKKELSKEEPVENSHVPEPSSVSGEPLLTLKLGKRLYFEDACPGSGSKNLSSSGAPVSSLSSGKKSKSNGQNIQNPRCQVEGCGLDLSSAKDYHRKHRVCESHSKSPRVVISGLERRFCQQCSRFHALSEFDEKKRSCRRRLSDHNARRRKPHPQAVQLNQSALSSSPYVGRQQMSPFPYSRTAPTLTWQDLRSNKLPHTKDFLMKPVKANDEMPSIVTMLSGDSNACLTSKGVATKSINPGRFPSLLTTKLHDLPLNLDSLFANSFSKHLTFAPTLLFIWWIAWFSGVEDSITSSDPNAAQDFHRALSLLSTNSWGSYETTKSMSIEHSNHTTQPMMTHAANQQRFPFAASMEYWHTDQQPVNPTTWIAATTYPNCDDSNRFHEFQLFREPYESGFPYDQLD* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2510 500 MobiDBLite consensus disorder prediction 94 111 - -
Aev03g2510 500 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 2 20 335 - -
Aev03g2510 500 Gene3D - 165 236 IPR036893 GO:0003677|GO:0005634
Aev03g2510 500 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 2 384 499 - -
Aev03g2510 500 MobiDBLite consensus disorder prediction 24 122 - -
Aev03g2510 500 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 384 499 IPR044817 GO:0003677
Aev03g2510 500 MobiDBLite consensus disorder prediction 142 172 - -
Aev03g2510 500 Pfam SBP domain 175 248 IPR004333 GO:0003677
Aev03g2510 500 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 20 335 IPR044817 GO:0003677
Aev03g2510 500 MobiDBLite consensus disorder prediction 42 93 - -
Aev03g2510 500 ProSiteProfiles Zinc finger SBP-type profile. 172 249 IPR004333 GO:0003677
Aev03g2510 500 SUPERFAMILY SBT domain 173 254 IPR036893 GO:0003677|GO:0005634
Aev03g2510 500 MobiDBLite consensus disorder prediction 141 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g2510 Aev-Chr3 26023267 26025621 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g2510 1 251 SBP-box Gene Family AT5G43270 50.973 1.17e-60 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Aev03g2510 SBP 1.2e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g2510 - - lang:109328770 538.11