Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2492 ATGATGGATGCTGCTGAGGTTGAAGAAAATCTGTTTGCAGCAAGTGATGCCAAGCTACATGGAGAAATGTGCAAGGCGCTTTCCCTAATATATTGCAAAGTGTTGTCAGTATTTCCTTCTTTAGAAGCAGCTAGGCCTAGGAGCAAATCTGGAATTCAAGCATTATGTTCACTGCATGTAGCCTTAGAGAAGGCTAAGAATGTTCTTCGGCACTGTTCAGAGTGTAGTAAACTTTACTTGGCTATAACTGGGGATTCTGTTCTTCTAAAATTTGAGAGGGCTAAATGTGCTCTCGAAGATAGTCTTAAACGGGTAGAAGATATTGTTCCGCAATCTATTGGCTGTCAGATTCAGGAGATTTTGAATGAACTTGCAATTATGTCATTTGCACTTGACCCATCAGAGAAGCAAGTTGGAGATGATTTAATTGCTTTGCTTCAGCAGGAGAGAAAGAATAACAACTCTAATGACAGCAATGAACTTGAATCTTTTCACCAGGCTGCTACTAGACTCGGAATTACATCTTCTAGGGCAGCTCTTACTGAAAGACGAGCTCTCAAGAAACTCATAGAAAGGGCTCGGGCTGAGGATGACAAGCGGAAGGAATCAATTGTTCAATATCTTTTTCACCTCATGAGGAAATACTCCAAATTATTTAGAAGTGAGTTCTCAGATGACAATGATTCTCAGGGTTCTGCACCGTGTTCTCCCACTGTTCAGGGATCTATTGAGGATGGTGTTCCTGGCGTTCATTGTCAGGCCTTTGACAGACAGCTTTCAAAACTTAGTTCCTTTAATTTTAGGGCAAATGATAGGATGTCAGGGCAGATGCCCTTTCCACCTGAAGAGTTAAGGTGCCCAATATCTCTGCAACTTATGTATGATCCGGTTATCATTGCTTCTGGACAAACATATGAACGGGATTGCATAGAGAAATGGTTCAGTGATGGGCACAACACCTGCCCAAAGACCCAACAGAAACTTTCACATCTTTGTCTGACTCCTAATTACTGTGTCAAGGGTCTTATTGCTAGTTGGTGTGAACAGAATGGAGTTCCTATTCCTGAAGGCCCTCCTGAATCCCTTGAACTTGACTACTGGAGATTGGCACTTTCAGAGTCTGAATCTACAAATTCAAGATCTGTAAACAGTGTTGGCTCTTGCAAGTTGAACGGTGTCAAAGTGGTTCCCTTAGAAGAGACTGGTATCACCGAGAGAACTGGGGAAAATGGTACTGAAAGTATGTCTACACTAGACATAGATACTGAGCAGTATTCAAGTCTTTTGAAAGTCTTAACCGAGGGTAACAATTGGAAAAGGAAATGTAAAGTTGTAGAACAATTAAGGCTGTTGCTGAAGGATGATGAAGAAGCCAGGATGTTTATGGGGGCTAATGGCTTTATCGAAGCACTTTTGCAGTTTTTGCAATCAGCTGTGAATGAAGGAAATTTGATGGCTCAGGAAAATGGGGCAATGGCTCTCTTCAACCTGGCTGTAAATAACAACAGAAATAAGGAAACTATGCTATCGGCAGGAGTATTATCATTGTTGGAGGAAATGATTTCCAACACTAGTTCTTATGGTTGTGCAACCGCCCTATACGTGAATCTCTCTTGCCTTGAAGAAGCCAAGCCTATGATTGCCATGAGTCAAGCTGTCCACTTCCTGATTCAGCTTCTTCTAGATGACTCTGATGTTCAATGCAAGCAAGATTCTATCCATGCTCTCTATAATCTTTCTACTGTGCCATCCAACATTCCATACCTCCTTTCATCTGGCATCATCAATGGCATACAATCCCTTCTTGAATCCCAGGGTGATTGCACTTGGACAGAAAAATGCATAGCTGTTTTGATACATTTGGCTTCTTCTCAAGTTGGAAGGGAGGAGATGGTATCAACTCCCGGACTCATAAGCACATTGGCCTCTGTAATGGACACAGGTAGCCTCCTTGAGCAGGAGCAAGCCGTCTCTTGTCTCCTGATCTTGTGTAACAGGAGTGAGACGTGTAGCGAGATGTTGCTTCAAGAGGGGGTTATACCTTCATTGGTTTCAATATCAGTGAATGGGACCCAAAGAGGTAGAGAAAAAGCTCAGAAACTCTTGATGCTGTTTAGAGAGCAGCGGCAACGAGACCATCCGCCAGAGGAGGCACATCAGGGCTCTCCTGAATCTGGCGATTTGTCTATGCAGCCTGCCGAAATGAAGCCGCAGCCGCAGTGCAAGTCGATGTCTAGAAGGAAGTCGGGGAAGGCTTTGAGCTTTTTGTGGAAAAGCAAGAGCTATTCTGTCTCCCAGTGTTAA 2304 0.4327 MMDAAEVEENLFAASDAKLHGEMCKALSLIYCKVLSVFPSLEAARPRSKSGIQALCSLHVALEKAKNVLRHCSECSKLYLAITGDSVLLKFERAKCALEDSLKRVEDIVPQSIGCQIQEILNELAIMSFALDPSEKQVGDDLIALLQQERKNNNSNDSNELESFHQAATRLGITSSRAALTERRALKKLIERARAEDDKRKESIVQYLFHLMRKYSKLFRSEFSDDNDSQGSAPCSPTVQGSIEDGVPGVHCQAFDRQLSKLSSFNFRANDRMSGQMPFPPEELRCPISLQLMYDPVIIASGQTYERDCIEKWFSDGHNTCPKTQQKLSHLCLTPNYCVKGLIASWCEQNGVPIPEGPPESLELDYWRLALSESESTNSRSVNSVGSCKLNGVKVVPLEETGITERTGENGTESMSTLDIDTEQYSSLLKVLTEGNNWKRKCKVVEQLRLLLKDDEEARMFMGANGFIEALLQFLQSAVNEGNLMAQENGAMALFNLAVNNNRNKETMLSAGVLSLLEEMISNTSSYGCATALYVNLSCLEEAKPMIAMSQAVHFLIQLLLDDSDVQCKQDSIHALYNLSTVPSNIPYLLSSGIINGIQSLLESQGDCTWTEKCIAVLIHLASSQVGREEMVSTPGLISTLASVMDTGSLLEQEQAVSCLLILCNRSETCSEMLLQEGVIPSLVSISVNGTQRGREKAQKLLMLFREQRQRDHPPEEAHQGSPESGDLSMQPAEMKPQPQCKSMSRRKSGKALSFLWKSKSYSVSQC* 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2492 767 PANTHER U BOX DOMAIN-CONTAINING 2 748 - -
Aev03g2492 767 SMART Ubox_2 283 346 IPR003613 GO:0004842|GO:0016567
Aev03g2492 767 SUPERFAMILY RING/U-box 271 355 - -
Aev03g2492 767 ProSiteProfiles U-box domain profile. 279 353 IPR003613 GO:0004842|GO:0016567
Aev03g2492 767 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 466 512 IPR000225 GO:0005515
Aev03g2492 767 CDD RING-Ubox_PUB 284 326 IPR045210 -
Aev03g2492 767 Gene3D - 401 714 IPR011989 -
Aev03g2492 767 Coils Coil 176 196 - -
Aev03g2492 767 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 2 748 - -
Aev03g2492 767 MobiDBLite consensus disorder prediction 710 749 - -
Aev03g2492 767 Pfam U-box domain 281 350 IPR003613 GO:0004842|GO:0016567
Aev03g2492 767 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 280 353 IPR013083 -
Aev03g2492 767 SUPERFAMILY ARM repeat 417 707 IPR016024 -
Aev03g2492 767 SMART arm_5 455 499 IPR000225 GO:0005515
Aev03g2492 767 SMART arm_5 540 581 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g2492 Aev-Chr3 25899580 25902748 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g2492 2 767 U-box Gene Family AT1G27910 68.041 0.0 1038
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g2492 - - gmx:100794099 1273.46