Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2484 ATGGATTCCGATTCAGACTCCGACGGATCCCATGTCTCTGCTACTCCTCCACGACGGTCAACTCCATCACCTCCACCACCAGCAGCCGCACAGCTACCTCTTCTAGTTTCCCGTAAATCCAGAATCAGAATCAAACCCTCCTCCTCCTCTAAACCCTCCAGCTCCAAATCACGTACTTCCGGACCCGACAAATCTCGCATTAAACCCGAACCCGAACCCGAACCAACCCAACAGGACCCTTTCTTCCTATTCTCCTCTACTCTGCCGTTCCAGATTCGGCGACCCTCCGATTGTGTGCCCGTGCCGTCTGCTTCCCAGCCCATCGAAACCCTACCGGCTGGGTTCTTCTCCAAATCTGCTTCCTTCTCGAGGATTCGAAGGCCATTTGTCAATTTCGAAGCTCCTAGAAACGAACCGCTTCTTGATTCTTCGTCCGATAAGGTTGAAATTCACGAGGTAGAAGAAGATCTTGGACTTATCGCTGCCAGAGAATCTGGGAGATCTGTAAAGAGGCATCACCCGAACCTTATAGGTGCTAATGCGCCAATGCCGGCCGTGAAGTTGCGAAAATGCGGCAATGAAGGGAACTTTGTGAAGTTGAACATGAGTGGCAAGAGGAAGAAGTTTCTGAACAAAGGGTGGAAGAAGAATGGGAAATTTTCCAGTGGTAAAAGCTATAGGAGAACAAGTAAAGGTAAGTTTGGAGATCGAGGGAAGGAGGATCAAGATGAACCCGGTTTCGATGGTGAACTTTTGGTTGCAGAAAGTGGAAAGAAGAAGCGAAATGGTAGTTGTAGAGCAAGAGAGATTGATTGCAAGTTGATGGAAGAGGCAGTTTTGGCGGCCCGAGCTGAACCCTCTGATGAGAATTTAGTGAATTTGCTGAGATTGGTTTATGGATATGATTCTTTTAGAGATGGGCAGCTGGAAGCGATCAAGATGGTGCTTGCTGGGAAGTCTACTATGCTTATTTTGCCGACCGGCGCAGGGAAGTCGCTGTGTTACCAATTGCCTGCGATGATTTTGCCTGGGATTACCATTGTTGTTAGTCCATTGGTGGCTTTGATGATTGACCAGCTAAGGCAATTGCCTCCGGTGATTAAGGGTGGTCTTCTAAGCAGTAGTCAGACACCTGAAGAAGCAGATGAATCGCTCAACAAGCTTCGGCAAGGTGAAATGAAGGTGCTTTTTGTTTCACCAGAGCGGTTCCTGAATGAAAAGTTTCTTTCTGTTATTTCTGGCATGTCAGGCATCTCACTTGTTATTGACGAAGCACATTGTATTTCTGAATGGTCACACAATTTCCGACCTTCTTTCATGAGACTTAGAGCATCCTTGCTTTGTAAAAAGCTCAATGTAGGTGCTATTCTTGCAATGACAGCAACTGCGACAACCACAACTTTAGATGCCATCATGTCTGCTCTAGATATTCCTTGCACAAATCTTATTCAGAAGGCACAACTAAGGGATAATTTTCATTTATCGGTGTCTTCAGTAAAAAATAGAATGAAAGATCTTCTGGGCCTGATCAAGTCTTCTCCTTTTTCGGAAGTTCAAAGTATCATCATATACTGCAAATTTCAGTCTGATACTGATATGGTTAGCAGATACTTGAACGATAACAATATCTTGGCAAAGAGTTATCATAGTGGTCTCACTGCAAAGGAACGTAGCTATGTACAGGACTTGTTTAGTTCCAACAAGATCCGAGTGGTTGTTGCAACTGTGGCCTTTGGCATGGGACTGGATAAAAGAGATGTTGGAGCTGTAATTCACTACAGTTTGCCTGAAAGTTTGGAGGAGTATGTGCAGGAGATAGGACGTGCTGGAAGGGATGGGAGGTTATCTTATTGTCATTTATTTTATGATGATGACACATATTTCAAACTTCGTAGTCTGATGCACAGTGAAGGGGTGGATGAATATGCAGTGAACAAATTTCTCCGCGAAGTGTTTCCTGCTGACAAGAAATCCTGTGGGAAAATATGTTCATTAATCAAAGAGTCTGCTTCACGCAAGTTTGATATGAAAGAAGAGGTGATGCTCACACTTTTTACACGCTTGGAGTTGGGAGATGTTCAGTACTTGCATCTACTTCCACAGATAAATGCAACTTGCTCTTTGTCATTTCATAAGACTCCCCCTCCTATGCTTGCCCAAAGGGAGTCTGTTGTTGCTGTAATTCTAAAAAGATCTGAAAATAAGCAAGGGCTGTATGTTTTTGACATTCCAACCGTGGCAAATGACATGGGGGTTACTGCAGTTGAATTAACAGATCACTTATACAAGCTGAAGTTGACGGGAGAAATAACTTACGAAATGAAGGACTTGGCCTACTGTTATAGAATTGTTGAAGTCCCAACAGACATTTTATCTCTATCAGCTGATATTACCCAATGGTTGTCCGAAGTTGAAAGTTGTAAGGTACGGAAAATGGATGCAATGTTTAATGCTGCATATTTCGCAGTAAATTTATGTGACAAGGCGTACGGCTGCAATGGTGCTGATCACACACCATGCTTGCAAAGAAGAATATTGGATTACTTTGCTGGAGTTGATAACAATGAGTCCTGCAAGAAAATTGGTCAAAGCAGCCCTTTCCTGCGGGCAGATATAAAGGTCTTTCTACAGAGCAATTCACATGCTCGATTTACACCAAGAGCCATCGCGAGGATATTGCACGGAATTGCAAGCCCGGCCTATCCTTCTACAACTTGGCGTACAACCCATTTCTGGGGAAGGTATACGCGTGTAGACTATCAGGTGGTGATGGAAGCAGCAAAGGCAGAACTTACGAATTGTGTCAGAAAAGATATGCACTGA 2823 0.4414 MDSDSDSDGSHVSATPPRRSTPSPPPPAAAQLPLLVSRKSRIRIKPSSSSKPSSSKSRTSGPDKSRIKPEPEPEPTQQDPFFLFSSTLPFQIRRPSDCVPVPSASQPIETLPAGFFSKSASFSRIRRPFVNFEAPRNEPLLDSSSDKVEIHEVEEDLGLIAARESGRSVKRHHPNLIGANAPMPAVKLRKCGNEGNFVKLNMSGKRKKFLNKGWKKNGKFSSGKSYRRTSKGKFGDRGKEDQDEPGFDGELLVAESGKKKRNGSCRAREIDCKLMEEAVLAARAEPSDENLVNLLRLVYGYDSFRDGQLEAIKMVLAGKSTMLILPTGAGKSLCYQLPAMILPGITIVVSPLVALMIDQLRQLPPVIKGGLLSSSQTPEEADESLNKLRQGEMKVLFVSPERFLNEKFLSVISGMSGISLVIDEAHCISEWSHNFRPSFMRLRASLLCKKLNVGAILAMTATATTTTLDAIMSALDIPCTNLIQKAQLRDNFHLSVSSVKNRMKDLLGLIKSSPFSEVQSIIIYCKFQSDTDMVSRYLNDNNILAKSYHSGLTAKERSYVQDLFSSNKIRVVVATVAFGMGLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLFYDDDTYFKLRSLMHSEGVDEYAVNKFLREVFPADKKSCGKICSLIKESASRKFDMKEEVMLTLFTRLELGDVQYLHLLPQINATCSLSFHKTPPPMLAQRESVVAVILKRSENKQGLYVFDIPTVANDMGVTAVELTDHLYKLKLTGEITYEMKDLAYCYRIVEVPTDILSLSADITQWLSEVESCKVRKMDAMFNAAYFAVNLCDKAYGCNGADHTPCLQRRILDYFAGVDNNESCKKIGQSSPFLRADIKVFLQSNSHARFTPRAIARILHGIASPAYPSTTWRTTHFWGRYTRVDYQVVMEAAKAELTNCVRKDMH* 941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2484 940 Gene3D - 275 480 IPR027417 -
Aev03g2484 940 Pfam Helicase conserved C-terminal domain 517 612 IPR001650 -
Aev03g2484 940 Pfam DEAD/DEAH box helicase 306 467 IPR011545 GO:0003676|GO:0005524
Aev03g2484 940 PANTHER ATP-DEPENDENT DNA HELICASE Q4 62 863 - -
Aev03g2484 940 CDD SF2_C_RecQ 489 622 - -
Aev03g2484 940 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 502 652 IPR001650 -
Aev03g2484 940 SMART ultradead3 300 495 IPR014001 -
Aev03g2484 940 MobiDBLite consensus disorder prediction 42 60 - -
Aev03g2484 940 MobiDBLite consensus disorder prediction 218 249 - -
Aev03g2484 940 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 344 632 IPR027417 -
Aev03g2484 940 PANTHER DNA HELICASE RECQ FAMILY MEMBER 62 863 - -
Aev03g2484 940 Gene3D - 489 675 IPR027417 -
Aev03g2484 940 TIGRFAM recQ_fam: ATP-dependent DNA helicase, RecQ family 294 641 IPR004589 GO:0004386|GO:0006310
Aev03g2484 940 CDD DEXHc_RecQ4-like 292 484 - -
Aev03g2484 940 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 312 481 IPR014001 -
Aev03g2484 940 MobiDBLite consensus disorder prediction 229 246 - -
Aev03g2484 940 MobiDBLite consensus disorder prediction 1 81 - -
Aev03g2484 940 SMART helicmild6 532 613 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g2484 Aev-Chr3 25842634 25848240 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g2484 522 645 Eukaryotic Initiation Factors Gene Family AT3G19760 31.746 2.10e-13 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g2484 K10730 - gmx:100811214 1241.48