Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2477 ATGTACTTGTCGGAAAAGCCGCGACCTATAGATTTCTACAAAGAAGACGGCACTTCCCGAGATATGATCATTGAGGTCGTCGCCAACGCCAACGGCGGTGACCTCCCTCCGCCACCGCCGCCGCCGCACCACCATCACCAGCAACAGCAGCAGATGATCCTCGGCGACAGCAGCGGCGGCGAGGACCCTGAGGTTGAGATCAAGGCCCCGAAGAAGCGCGCTGAAACTTGGGTCCACGAGGAGACCCGGACCCTGATCGCTCTACGGCGAGAGATGGATGGGCTCTTCAACACTTCCAAGTCGAACAAGCATCTCTGGGAACAGATATCGTCGAAGATGCGGGATAAGGGTTTTGATCGGTCTCCGACGATGTGCACGGACAAGTGGAGGAATCTGTTGAAGGAATTTAAGAAGGCTAAGCACGGTGGAGGCGACACTCCCGGTGGTGGTGGTGGAGGAGGAGGAAGTGGCGGCGGAGGTTCTGCGAAGATGTCGTATTATAAAGAAATCGAAGAGATTCTCAGGGACAGGAGCAAGTGTGTTCAGTACAAGAGCCCAACTCCACCACCTCCTCCTCCTCCAGCGAATCACAAAGTTGATTCGTTCATGCAGTTCACTGATAAAGGTATTGAGGATACCACCATCTCTTTTGGTCCAGTTGAAGCTAGTGGAAGACCAACACTCAATCTTGAGAGACGATTGGATCACGATGGACATCCTCTTGCCATTACAACGGCTGATGCTGTCGCAGCTAGTGGAGTTCCTCCTTGGAATTGGAGAGAAACTCCTGGAAATGGTGAAGAAGGTCAGTCATGTTGCGGAAGGGTTATATCAGTCAAATGGGGAGACTATACAAGAAGGATAGGTATTGATGGTGCTTCAGAAGCCATCAAGGAGGCAATAAGAGCTGCTTTCAGGTTGAGAACTAGACGGACATTTTGGTTGGAGGATGAAGACCAGATAATCAGAAGTATTGATCGTGACATGCCTTTAGGAAATTACACTCTTCACCTCGATGAAGGAATGGCAATTAAAATATGTCTGTATGATGAGTCTGACCATATTCCTGTGCATACTGAAGAGAAGATCTTCTACACAGAAGATGACTATCGTGATTTTTTGACTCGCCGGGGTTGGACCTGTCTAAGAGAATTTGATGGCTATAGAAATATTGACAATATGGATGATCTTCGACCTGGTGCCATGTACCGTGGTGTGAGTTGA 1224 0.4943 MYLSEKPRPIDFYKEDGTSRDMIIEVVANANGGDLPPPPPPPHHHHQQQQQMILGDSSGGEDPEVEIKAPKKRAETWVHEETRTLIALRREMDGLFNTSKSNKHLWEQISSKMRDKGFDRSPTMCTDKWRNLLKEFKKAKHGGGDTPGGGGGGGGSGGGGSAKMSYYKEIEEILRDRSKCVQYKSPTPPPPPPPANHKVDSFMQFTDKGIEDTTISFGPVEASGRPTLNLERRLDHDGHPLAITTADAVAASGVPPWNWRETPGNGEEGQSCCGRVISVKWGDYTRRIGIDGASEAIKEAIRAAFRLRTRRTFWLEDEDQIIRSIDRDMPLGNYTLHLDEGMAIKICLYDESDHIPVHTEEKIFYTEDDYRDFLTRRGWTCLREFDGYRNIDNMDDLRPGAMYRGVS* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2477 407 Gene3D - 77 139 - -
Aev03g2477 407 ProSiteProfiles Myb-like domain profile. 69 133 IPR001005 -
Aev03g2477 407 PANTHER TRIHELIX TRANSCRIPTION FACTOR GT-4 5 406 - -
Aev03g2477 407 MobiDBLite consensus disorder prediction 139 163 - -
Aev03g2477 407 PANTHER - 5 406 - -
Aev03g2477 407 SUPERFAMILY Homeodomain-like 73 134 IPR009057 -
Aev03g2477 407 Pfam Myb/SANT-like DNA-binding domain 76 171 IPR044822 -
Aev03g2477 407 CDD GT1 75 140 - -
Aev03g2477 407 SMART sant 73 135 IPR001005 -
Aev03g2477 407 MobiDBLite consensus disorder prediction 29 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g2477 Aev-Chr3 25801833 25807116 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g2477 1 406 Trihelix Transcription Factor Family AT3G25990 64.373 0.0 519
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Aev03g2477 Myb_DNA-bind_4 2.2e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g2477 - - aip:107632016 700.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g2477 03 25801833 25807116 Aev03g2477 03 25801833 25807116 ECH