Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2465 ATGGATAATGGTTGCTTCCCTTCGACACGCCGTGACGGTTTTCCAGCTGGCCTAAGAGTTCTGGTTGTTGATGATGATCTAACATGGCTGAGGATCCTTGAAAAGATGCTCAAGAAGTGTTCCTATGAAGTGACTACATGTTGTTTAGCAACAGAAGCTCTAAAGAAGCTTCGCGAGAAGAAAAATGGATATGACATAGTGATCAGTGATGTAAACATGCCTGACATGAATGGTTTCAAACTTCTTGAGTATGTTGGACTTGAAATGGATCTTCCTGTCATTATGATGTCTGTTGATGGAGAAACAAGCAGGGTGATGAAAGGTGTTCAGCATGGAGCATGTGATTATCTACTCAAGCCTATAAGGATGAAAGAACTGCGAAATATATGGCAACATGTCCTGAGAAAAAGGATACATGAGGCAAGAGAATTTGAGGGTCATGAGGGTTTTGAGGGCATTCACTTGATGATAAATGGATCAGATCAGTCCGATGAGGGGAGCATGTTTGCATTAGAAGATATCAGCTCATCTAGGAAAAGGAAAGATCTAGATAACAAACACGACGATAGAGAATTCGGAGATCAATCTTCCACAAAGAAAGCTAGAGTAGTTTGGTCTGTGGATCTTCATCAGAAGTTTGTCCAAGCAGTGAACCAGATTGGATTGGATAAAGTCGGTCCCAAGAAAATTCTGGATTTGATGAATGTTCCATGGCTAACTAGAGAAAATGTTGCTAGTCACCTACAGAAATACCGGCTATACTTGAGTAGGTTGCCGAAAGGAAAAGATCGTAAATCTTCAAAAGATCCAGGAAGCTCTAGTCTTCAGAGCCCTATAAACAAGCAACAAAATGAGGTTGCAATTGATTGCTTCAGATGTACAGATAAAACATTACAACTTCAGAACATGGTTGCTACAACTGATAAAGGTGATTCTAAAGGAATTGTGTCAGAACCCGAAACACAGAAAGTAAGAGTTGATAGACCTTTTGCACCTCACAATTCAGAAGGAAATCATGCAGTATTTGATTGCACCAGCCAGTTACCATTACATGTTGATCAATCACAATCAATTGCTTCAGTTAATTCCAATCCCTCTTTAACAGAAGATGTTCCAGCATGTTCAAAAACCAAACCTTTGTATGCTGATTACAGAAGTGATTGCCTCAGTCCAAAAGGGTCTGCAGTTAACACCATTCCAATTCAGTCCAAAAACCTTATGGTGAATGATCAATCTTCAGACCCCATTTTCACTTCAAATTTGGGCTTCAGCATTTCTGATCTGGAAATTTACCAGAAGAACCTGCTCTTTGGGGGCGAGGCAGCAGCTTATGCACCTTTGGAGGAGGACTTGAATTTCTTCTTGCTGCAAGCTGAATGCTATAATATGAACTTCGATCTGCAGAATATAGAGATGTCAGAGTACTATGATCCGGGGCTTATCGCCGAAGTTCCGGCATATCTATATGATTCGGCAGATTATTCGGTAGTAGATCAAAGTCTATTCATCGCGTGA 1515 0.4059 MDNGCFPSTRRDGFPAGLRVLVVDDDLTWLRILEKMLKKCSYEVTTCCLATEALKKLREKKNGYDIVISDVNMPDMNGFKLLEYVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVLRKRIHEAREFEGHEGFEGIHLMINGSDQSDEGSMFALEDISSSRKRKDLDNKHDDREFGDQSSTKKARVVWSVDLHQKFVQAVNQIGLDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLSRLPKGKDRKSSKDPGSSSLQSPINKQQNEVAIDCFRCTDKTLQLQNMVATTDKGDSKGIVSEPETQKVRVDRPFAPHNSEGNHAVFDCTSQLPLHVDQSQSIASVNSNPSLTEDVPACSKTKPLYADYRSDCLSPKGSAVNTIPIQSKNLMVNDQSSDPIFTSNLGFSISDLEIYQKNLLFGGEAAAYAPLEEDLNFFLLQAECYNMNFDLQNIEMSEYYDPGLIAEVPAYLYDSADYSVVDQSLFIA* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2465 504 Gene3D - 18 190 - -
Aev03g2465 504 PANTHER TWO-COMPONENT RESPONSE REGULATOR 7 326 - -
Aev03g2465 504 PANTHER TWO-COMPONENT RESPONSE REGULATOR 346 479 - -
Aev03g2465 504 Pfam Response regulator receiver domain 20 129 IPR001789 GO:0000160
Aev03g2465 504 CDD REC_typeB_ARR-like 20 134 - -
Aev03g2465 504 SUPERFAMILY Homeodomain-like 198 257 IPR009057 -
Aev03g2465 504 Pfam Myb-like DNA-binding domain 202 252 IPR001005 -
Aev03g2465 504 SMART REC_2 18 130 IPR001789 GO:0000160
Aev03g2465 504 MobiDBLite consensus disorder prediction 259 280 - -
Aev03g2465 504 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 200 253 IPR006447 GO:0003677
Aev03g2465 504 ProSiteProfiles Response regulatory domain profile. 19 134 IPR001789 GO:0000160
Aev03g2465 504 PANTHER TWO-COMPONENT RESPONSE REGULATOR 7 326 IPR045279 GO:0009736
Aev03g2465 504 PANTHER TWO-COMPONENT RESPONSE REGULATOR 346 479 IPR045279 GO:0009736
Aev03g2465 504 SUPERFAMILY CheY-like 17 141 IPR011006 -
Aev03g2465 504 Gene3D - 196 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g2465 Aev-Chr3 25741457 25744116 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g2465 12 258 Response Regulator Gene Family AT2G25180 55.598 6.21e-83 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Aev03g2465 Response_reg 1e-23 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g2465 - K14491 gmx:100778324 721.465