Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2456 ATGCCACCAACAAATACTGTTCGGTGGCCATCAGCGATTAGCATTAAAGATAATTGGGTTTTGCAGGTGGGCCTTTCTCCTTCAGTCCATTTGCTCTGTTTCTTGGTTTGGTTCTTGTTGAGATCCGGTGCCTTATTGGATTCGTTTCTCTCTGCCTTAGATCTGCTGGCTTTTGGAGTTCCTGAGGATCTTTGGTTTCTGGGTCGTGTTTGGTTTTTGAGGTTCTTGGTAAATTTGGTGCAGCAAAGAGGGGAAAAAGAAGATTACTGCAGCCGGTGCTTACTTGCTGTTGGTGCTGGAAACGCTGATATTGTTGCTGCTCAATTGGTTTACTTAAGAAGTTTGTTTGAATCGTTAACTGTGGGATCGGTTCCAAGGTTTGAAATTGCTGAAATGAAGCTCTCTTCAGCTGGTTTTAGTCCTCCACCCGAAGAAGGAGAAAAGCGAGTTCTTGATTCAGAACTTTGGCATGCATGTGCTGGTCCTCTTGTTTCTTTACCAGCTGTTGGAAGCCGTGTGGTTTACTTTCCACAAGGTCACAGTGAACAGGTTGCTGTGTCAACCAACAGGGAAGTGGATGCCCAAATCCCCAACTATCCAAGCTTGCCTCCCCAACTTATTTGTCAACTTCACAATTTGACTATGCATGCTGATACCGAGACAGATGAAGTATATGCACAGATGACCTTGCAACCTCTAAATCCTCAAGAGCAAAAAGAGGCTTACCTTCCAGCAGAGTTGGGTGCTCCAAGTAAACAGCCAACAAACTATTTTTGCAAAACTTTGACAGCCAGTGATACAAGTACTCATGGGGGGTTCTCTGTTCCTCGCCGGGCAGCTGAAAAAGTGTTTCCTCCACTGGACTTCTCCCAGCAGCCTCCTGCTCAAGAGTTGATCGCTAGAGATTTGCATGGCAATGAATGGAAATTCAGACATATTTTCCGGGGCCAGCCCAAAAGGCATCTGCTGACCACAGGATGGAGTGTCTTCGTGAGTGCAAAAAGACTTGTTGCTGGTGACTCTGTGCTATTCATCTGGAATGATAAGAATCAATTGCTTCTTGGCATTCGGCGTGCTAATCGACCACAACCTGTGATGCCTTCATCAGTGTTATCAAGTGATAGCATGCACTTGGGGCTTCTTGCTGCTGCAGCTCATGCAGCCGCAACGAATAGTCGATTCACCATTTTCTATAACCCACGTGCTTGCCCATCAGAATTTGTCATACCCTTGACAAAGTATGTTAAGGCTGTTTATCATATCCGAGTTTCAGTTGGTATGCGTTTCAGAATGCTTTTTGAAACAGAGGAATCTAGTGTGAGACGCTACATGGGCACAATAACTGGCATTAGTGACTTGGATCCAGCCCGGTGGCCAAATTCACATTGGCGTTCAGTCAAGGTTGGCTGGGATGAGTCCACTGCAGGAGACAGGCAACCTCGAGTGTCTCTATGGGAAATTGAGCCATTAACAACTTTTCCGATGTATCCATCTCCATTCCCTCCTAGGCTTAAAAGACCATGGCCTTCAGGACTTCCTTCATTCCATGGCATGAAGGAAGATGATTTTGGCATAAGTTCTTCACTAATGTGGCTTAGAGACACGGATAGAGGTCTCCATTCTCTTAATTTTCAAGGGATTGGTGTTAGTCCATGGATGCAGCCAAGGCTTGACCCTGCAATGATGAATTTGCAAACAGATATGTACCAAGTCATGGCTGCTGCTGCACTTCAGGATATGAGGACTTTAGATCCTTCCAAACAGCATCCCGCTTCCTTACTTCAATTTCAGCAACCCCAGGTCATCCCTAACAGGACTGATGCTTTGATGCAAACCCAGATATTGCAGCAGCCTCAACATCAGCAGGCATTTCCTGGCAATCAAGAAAATCAGCATCCATCTCAATCTCAATCTCCGCATCAAACTCAAACGACACACCTTCATCAGCATCTACAGAGTCAGCACTTATTCAACATTCAGAATCATCAGCAGCCACAGCAACAACATCAGCCGCAGCAACAACAGCAGCCACAACAACATCAGCAACCACAACAGCAGCAGCAACAGCAACAACAGTTGGTAGATCATAAGCCAATTTCAAGTGTTGTCTCAGCAATGTCTCAGTTTGTTTCAGCTCCTCAATCTCAATCCTCGCCCATGCAAGCGCTCTCTTCACTGTGCCATCAGCAAAGTTTTTCTGATTCAAATGGTATTCCTGTTACCAGTGCTGTTGTTTCTCCACTGCACAGCATGTTGGGTTCATTTCACCAGGATGAAACATCCCACCTTCTTAACCTTCCTAGAACAAGCTCTTGGGCTCCTGTTCAATCTTCAACTGCTTGGCCCTCCAAGCGTGTTGCACTGGATCCTCTTCTTTCTGGAGCATCTCAATGTGTTCTGCCTCAGGTTGAGCAGTTGGGGCAACCACAGAGTACCATGTCTCATAATGCTATTACATTGCCACCATTTCCTGGCAGGGAGTGTACAATAGAAGGGAGCACCGATCCGCAGAACCATCTTTTGTTTGGTGTTAATATAGATCCCTCGTCACTTCTAGTGCATCATGGTATGTCGAATCTTAAGGGGGTTAGCGGCAACAGTGACTCATCAACCATACCTTTTCAATCTTCCAATTACCTGAATACCACAGGCACCGATTCTTCTTTGAATCCTGCAATGACACACAGCAATGGTGACTCGGGCTTCCTGCAAACTCCAGAAAATGGAGGTGAGGGAAGCCCGCAAAATAAAACCTTTGTGAAGGTTTACAAGTCGGGGACCTACGGACGATCATTGGATATCACTAAATTCACCAACTACCATGAGCTGCGCAGTGAGCTTGCTCGCATGTTCGGCCTTGAAGGTGAGTTGGAGGACCCTCTGAGATCAGGCTGGCAGCTTGTATTTGTGGACCGAGAGAACGACGTTCTTCTCCTCGGTGATGGCCCTTGGCCGGAATTTGTAAATAGTGTATGGTGCATCAAGATACTTTCTCCTCAGGAAGTACAGCAAATGGGCAACAATGCCCTCGGTCTTCTGAACTCTGTTCCAATTCAGAGGCTTTCAAATGGCATCTGTGATGACTACACAGCAGCAGGCCATGAGGACCCAAGAAATCTAAGCACTGGGAGTGGCATGACCACTGTGGGTTCATTAGACTTCTGA 3165 0.4632 MPPTNTVRWPSAISIKDNWVLQVGLSPSVHLLCFLVWFLLRSGALLDSFLSALDLLAFGVPEDLWFLGRVWFLRFLVNLVQQRGEKEDYCSRCLLAVGAGNADIVAAQLVYLRSLFESLTVGSVPRFEIAEMKLSSAGFSPPPEEGEKRVLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNREVDAQIPNYPSLPPQLICQLHNLTMHADTETDEVYAQMTLQPLNPQEQKEAYLPAELGAPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPQPVMPSSVLSSDSMHLGLLAAAAHAAATNSRFTIFYNPRACPSEFVIPLTKYVKAVYHIRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPARWPNSHWRSVKVGWDESTAGDRQPRVSLWEIEPLTTFPMYPSPFPPRLKRPWPSGLPSFHGMKEDDFGISSSLMWLRDTDRGLHSLNFQGIGVSPWMQPRLDPAMMNLQTDMYQVMAAAALQDMRTLDPSKQHPASLLQFQQPQVIPNRTDALMQTQILQQPQHQQAFPGNQENQHPSQSQSPHQTQTTHLHQHLQSQHLFNIQNHQQPQQQHQPQQQQQPQQHQQPQQQQQQQQQLVDHKPISSVVSAMSQFVSAPQSQSSPMQALSSLCHQQSFSDSNGIPVTSAVVSPLHSMLGSFHQDETSHLLNLPRTSSWAPVQSSTAWPSKRVALDPLLSGASQCVLPQVEQLGQPQSTMSHNAITLPPFPGRECTIEGSTDPQNHLLFGVNIDPSSLLVHHGMSNLKGVSGNSDSSTIPFQSSNYLNTTGTDSSLNPAMTHSNGDSGFLQTPENGGEGSPQNKTFVKVYKSGTYGRSLDITKFTNYHELRSELARMFGLEGELEDPLRSGWQLVFVDRENDVLLLGDGPWPEFVNSVWCIKILSPQEVQQMGNNALGLLNSVPIQRLSNGICDDYTAAGHEDPRNLSTGSGMTTVGSLDF* 1055
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2456 1054 SUPERFAMILY CAD & PB1 domains 914 992 - -
Aev03g2456 1054 SMART B3_2 258 360 IPR003340 GO:0003677
Aev03g2456 1054 Pfam AUX/IAA family 911 1002 IPR033389 -
Aev03g2456 1054 PANTHER AUXIN RESPONSE FACTOR 132 1030 - -
Aev03g2456 1054 CDD B3_DNA 257 358 IPR003340 GO:0003677
Aev03g2456 1054 ProSiteProfiles B3 DNA-binding domain profile. 258 360 IPR003340 GO:0003677
Aev03g2456 1054 MobiDBLite consensus disorder prediction 1033 1054 - -
Aev03g2456 1054 ProSiteProfiles PB1 domain profile. 917 1001 IPR000270 GO:0005515
Aev03g2456 1054 MobiDBLite consensus disorder prediction 882 917 - -
Aev03g2456 1054 MobiDBLite consensus disorder prediction 617 695 - -
Aev03g2456 1054 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 132 1030 IPR044835 GO:0003677|GO:0006355|GO:0009725
Aev03g2456 1054 MobiDBLite consensus disorder prediction 1040 1054 - -
Aev03g2456 1054 Gene3D - 913 1006 - -
Aev03g2456 1054 SUPERFAMILY DNA-binding pseudobarrel domain 243 387 IPR015300 -
Aev03g2456 1054 Pfam Auxin response factor 384 467 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Aev03g2456 1054 Gene3D - 422 494 - -
Aev03g2456 1054 Gene3D - 256 359 IPR015300 -
Aev03g2456 1054 Pfam B3 DNA binding domain 258 359 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g2456 Aev-Chr3 25688582 25697419 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g2456 132 619 B3 DNA Binding Superfamily AT1G30330 84.584 0.0 828
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Aev03g2456 AUX_IAA 1e-07 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g2456 - - gmx:100777789 1508.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g2456 03 25688582 25697419 Aev03g2456 03 25688582 25697419 ECH