Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2447 ATGGAGGAAGAAAAGCGACGCAGTGTTCCTGTTCTGCCATGGATGCGAGACCCCGTTGACCTCACTCTCTGCGAAGAGCTTCCCCTCGAAACTGTCCCTTCCATCCACCCCAAGTTGAAATCGGCGTTGGAGAACATGGGGATCTCTAAGCTGTTCCCGGTGCAAGTTGCGGCTTGGCAAGAAACCATTGGTCCGGGCCACTTCGAGCGAGACCTCTGCATAAACTCTCCGACAGGAAGCGGTAAAACCTTGGCTTACGCTCTCCCCATTGTCCAATTGCTCTCAAAGCGCGTGGTTAGGTGTCTTCGTGCCCTGGTGGTGGTGCCCACGCGCGACCTCGCCTTGCAGGTCAAGCGCGTCTTCGACGGCGTGGCTTCACCGCTGGGGTTGCGCGTGGGCTTGGCCGTTGGCCAGTCTTCTATTGCTGACGAAATCGCCGAGCTGGTGTACATGCCGGAATGCGAGGGGGGAATGTGTTATGATGGTGGAGATGTTGTTCGGAGTGGGTTGAGGAGTAAGGTGGATATATTGGTGGCAACACCTGGAAGGTTGATGGATCATATCAACACAACTAAGGGATTCACTCTTGAGCATCTTTATTATCTTGTGGTTGATGAAACAGATAGATTACTCCGGGAGGCATACCAGTCCTGGCTTCCTACTGTGATTGAGTTGACCCAATCAAATGACGATAATAATTTTCAGCCAATTGATTCTGTTTTTCCTCATTCTCTTGGTGCATTAAGAACCATAAGAAGATGTGGAGTTGAGAGGGGCTTTAAGGATAAGCCCTACCCTAGGTTGGCAAAGATGGTTTTATCTGCGACAATTACTCAGGACCCAGGCAGGCTCGTTCAGCTTAAACTGCATCACCCTTTATTTCTGAAAGCTGGGCAAATGCGTTATCGACTTCCAGAAAATTTGGAATCCTACAAACTGATCTGTGAAGCAAAGGTCAAACCCTTGTATTTGGTTGCCCTTCTGAAATCACTGGAAGGAGAAAAATGCATAATTTTTACAAAATCTGTGGATTCAACTCATCGACTCTGCAAACTGCTGAATTGTTTTGGAGATCTGAAAATTGATATCAAAGAGTATTCTGGTCTTCAACATCAACGTGTAAGAAGTAAGACATTGAATGAATTTCGGAAAGGTGAGTTTCAAGTGCTTGTATCTTCTGATGCAATGACTCGTGGGATGGATGTTGAAGAGGTGAGAAGTGTCATTAACTATGACATGCCCAAATATGTAAAGACTTATGTTCATCGGGCTGGTAGGACGGCACGAGCTGGCCAGACTGGACACTGCTACACATTGATGTCCAAAGATGAGGTGCGTCGATTTAAGAAGTTGATGCTAAAGGCTGAGGCTAGTTCCTGCCATGAGCACAGCATTCAATCCAGTTTGATTGAAGCACTTCGACCTTCTTATGAAACTGCACTAAAAACATATAAGGAGAAGATTTTAGAGGCAAGAAAGAAATCAAAGGATTAG 1494 0.4665 MEEEKRRSVPVLPWMRDPVDLTLCEELPLETVPSIHPKLKSALENMGISKLFPVQVAAWQETIGPGHFERDLCINSPTGSGKTLAYALPIVQLLSKRVVRCLRALVVVPTRDLALQVKRVFDGVASPLGLRVGLAVGQSSIADEIAELVYMPECEGGMCYDGGDVVRSGLRSKVDILVATPGRLMDHINTTKGFTLEHLYYLVVDETDRLLREAYQSWLPTVIELTQSNDDNNFQPIDSVFPHSLGALRTIRRCGVERGFKDKPYPRLAKMVLSATITQDPGRLVQLKLHHPLFLKAGQMRYRLPENLESYKLICEAKVKPLYLVALLKSLEGEKCIIFTKSVDSTHRLCKLLNCFGDLKIDIKEYSGLQHQRVRSKTLNEFRKGEFQVLVSSDAMTRGMDVEEVRSVINYDMPKYVKTYVHRAGRTARAGQTGHCYTLMSKDEVRRFKKLMLKAEASSCHEHSIQSSLIEALRPSYETALKTYKEKILEARKKSKD* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2447 497 Gene3D - 20 298 IPR027417 -
Aev03g2447 497 Pfam DEAD/DEAH box helicase 53 281 IPR011545 GO:0003676|GO:0005524
Aev03g2447 497 Pfam Helicase conserved C-terminal domain 320 431 IPR001650 -
Aev03g2447 497 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 323 473 IPR001650 -
Aev03g2447 497 CDD SF2_C_DEAD 308 439 - -
Aev03g2447 497 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 102 450 IPR027417 -
Aev03g2447 497 PANTHER RNA HELICASE 28 481 - -
Aev03g2447 497 SMART helicmild6 347 431 IPR001650 -
Aev03g2447 497 Gene3D - 307 497 IPR027417 -
Aev03g2447 497 SMART ultradead3 47 311 IPR014001 -
Aev03g2447 497 CDD DEADc_DDX51 39 295 - -
Aev03g2447 497 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 63 295 IPR014001 -
Aev03g2447 497 PANTHER ATP-DEPENDENT RNA HELICASE DDX51 28 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g2447 Aev-Chr3 25633612 25637080 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g2447 71 446 Eukaryotic Initiation Factors Gene Family AT3G13920 23.238 4.69e-26 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g2447 K14807 - cit:102616133 699.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g2447 03 25633612 25637080 Aev03g2447 03 25633612 25637080 ECH