Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2409 ATGGATCAACATGCTCACATACCCTTAGTCCTTACATCAGTATTCACCACAATCACCTTGTTCTGCTTGACCACTCTGCCAACACCATCCATTTGCCAAGAAGATGATGATAAACACACCATTTGTAGCAGAGCATACAGTTGTGGAGGATTATCCAACATCTATTACCCTTTCTGGGGAGAGAGCAGACCGAGTTTCTGCGGAGTTAGCCAGCAATTCAAGCTCAACTGTCATGCAAATAATAACAACACCACCATTCAACTTGGTTCACAGACTTTTCAAGTTTTGAGTATCAACCAACTTGCTTACACAATGAGAATTGTTAGAACAGGCCTTGCTTATGATCGTTGCTCTTCTGGTCTGACCAACACTTCATTGGACACAAGGCAATTTCGTTACTTGCCGAGTGTTAGGAACATCACCATCTTCTATGACTGCCCTGGGAACAGGCTTTGGAATGGGACACGGTCTTTTCTGTGCTTGGATGATAGGAACAAAAGAGGTTTCTATGTGGAGTCATCAAGAAATAGTAATAATAATGGGGAGGTTCAGAATTGCCAAGGAGTTAGTGTTGAAGTGCAGGTGACAAAGGAATTGGGGAGTGAGGGTGGAATTGGAGGGCTGAACAAAGCATTAAGTGGTGGTTTTGATGTGAATTATACTTCAATTTCAGAGAGTGAAAGATGCTATAGATGCCTTTCAACTGAAGGAATCTGTGGAAGCAGTGATGGGTCTCGGTTTACATGCTATTGCCCTGATGGAACTGATGCTTTAGACTGTTCTCATCATCACAGCAGTAAATGGAACTGGAAAAGGAAGGTTGCTATAGGAGTTGCTGCTGCTGTGGTGAGTGCAGTTGTAGCAAGCATTGCCTTTTACATCTATTACTGCCGAAAGAAGAAGAACCTTCAGACATTACCAATTATGCCATCTCGGAGCCTCTCTTCTTGTCCTTCTTTAGAAGGCACTGAGAAGGGATGTAAATATTCTGGTCTTCAATTCTTTTCCTATACTGAACTTGAAGAGGCCACAAACTACTTTGATTCATCCAGAGAACTAGGAGATGGAGGCTTTGGCACTGTTTATTTTGGAAAACTCCGGGATGGCCGTTTCGTCGCAGTGAAAAGGATGTATGAGAACAATTACAGAAGAGTAGAGCAGTTCATGAATGAAGTTGAGATCTTAACAGGCCTGCGCCACCAAAACCTTGTGTCACTATATGGATGCACATCTCGGCAGAGCCGCGAACTTCTGCTTGTGTATGAGTACATTCCTAATGGAACAGTTGCTGATCATCTCCATGGCCATAAGGCCAAACCTGCTGCAGGCAAACTCTCCTGGGATATCAGAATGAACATTGCCATAGAAACTGCCAGTGCATTGGCATATTTGCATGCTTCTGATATCATCCACAGAGATGTGAAAACCAACAACATCCTCCTTGATGATCACTTCAGTGTCAAAGTAGCAGATTTTGGACTTTCAAGACTATTACCAAACCATGTCACTCACATTTCAACTGCACCACAAGGGACTCCAGGTTATGTGGATCCAGAATACCATGAGTACTACCAACTCACTGACAAAAGCGATGTCTACAGCTTCGGGGTCGTTCTGATGGAGCTGATTTCATCCATGCCTGCTGTTGATATCTCAAGGCAGAGGCAAGAAATCAATTTGTCTAACATGGCACTGAAGAAGATTCAGGGTGGGGAATTGCACGAGCTTGTGGACCCTGCACTTGGTTTTGAATCAGATTTCAAGGTAAGGAAGATGATAAATGCAGTGGCAGAGTTAGCATTTCAGTGCTTGCAGAGTTCTAAAGATATGAGACCTTCTATGCTGCAAGTGCTGGATACTCTGAAGGATATACAGAGTGATGGGAAATATAAGATCAGTAAACCTGAGGTGATGGATATATCAGAACATGATGATGATGATGCTGTTGCTGTGTTGAAGACTGAACCACCTCCACCTTCCCCTGATTCTAATTTGATCAGCTGA 2004 0.4326 MDQHAHIPLVLTSVFTTITLFCLTTLPTPSICQEDDDKHTICSRAYSCGGLSNIYYPFWGESRPSFCGVSQQFKLNCHANNNNTTIQLGSQTFQVLSINQLAYTMRIVRTGLAYDRCSSGLTNTSLDTRQFRYLPSVRNITIFYDCPGNRLWNGTRSFLCLDDRNKRGFYVESSRNSNNNGEVQNCQGVSVEVQVTKELGSEGGIGGLNKALSGGFDVNYTSISESERCYRCLSTEGICGSSDGSRFTCYCPDGTDALDCSHHHSSKWNWKRKVAIGVAAAVVSAVVASIAFYIYYCRKKKNLQTLPIMPSRSLSSCPSLEGTEKGCKYSGLQFFSYTELEEATNYFDSSRELGDGGFGTVYFGKLRDGRFVAVKRMYENNYRRVEQFMNEVEILTGLRHQNLVSLYGCTSRQSRELLLVYEYIPNGTVADHLHGHKAKPAAGKLSWDIRMNIAIETASALAYLHASDIIHRDVKTNNILLDDHFSVKVADFGLSRLLPNHVTHISTAPQGTPGYVDPEYHEYYQLTDKSDVYSFGVVLMELISSMPAVDISRQRQEINLSNMALKKIQGGELHELVDPALGFESDFKVRKMINAVAELAFQCLQSSKDMRPSMLQVLDTLKDIQSDGKYKISKPEVMDISEHDDDDAVAVLKTEPPPPSPDSNLIS* 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2409 667 Pfam Wall-associated receptor kinase galacturonan-binding 42 109 IPR025287 GO:0030247
Aev03g2409 667 MobiDBLite consensus disorder prediction 633 651 - -
Aev03g2409 667 ProSitePatterns Serine/Threonine protein kinases active-site signature. 469 481 IPR008271 GO:0004672|GO:0006468
Aev03g2409 667 CDD STKc_IRAK 353 624 - -
Aev03g2409 667 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.2 17 664 - -
Aev03g2409 667 Gene3D Transferase(Phosphotransferase) domain 1 424 646 - -
Aev03g2409 667 Gene3D Phosphorylase Kinase; domain 1 320 423 - -
Aev03g2409 667 MobiDBLite consensus disorder prediction 633 667 - -
Aev03g2409 667 Pfam Wall-associated receptor kinase C-terminal 165 254 IPR032872 -
Aev03g2409 667 SUPERFAMILY Protein kinase-like (PK-like) 329 621 IPR011009 -
Aev03g2409 667 ProSitePatterns Protein kinases ATP-binding region signature. 353 375 IPR017441 GO:0005524
Aev03g2409 667 SMART serkin_6 347 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev03g2409 667 Pfam Protein kinase domain 348 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev03g2409 667 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 17 664 IPR044652 -
Aev03g2409 667 ProSiteProfiles Protein kinase domain profile. 347 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g2409 Aev-Chr3 25349979 25353275 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g2409 38 663 Receptor kinase-like Gene Family AT1G25390 44.532 2.10e-153 456
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Aev03g2409 Pkinase 5.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g2409 - - vra:106766190 835.484