Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2407 ATGATTGGAGGCAAAGACCTTCGTAATGGTGTTGACTCTGAGGGTGAGAATTCCAGGAGCAAGCTATCAAGGCCGAATTTTGAGCCTAGAAAGGAGTACCCGGATGAAAAAGGTGTTGAATTTCTGAGAGATTCAGAGGTGGGTGTTGGTGGTAGTGTTGATGGGGCTCTTCAGTCAAAACCCGCCATGGTTGTTGTTGGAACAAGCTCAGGGCTGCAAGAGCTCACCTTGAGCTACCTCTGTGACAACCAAAAACTGGGTCTTGCTGAGAAAGACGTTCCTGGTAAGAGCTTGTTGAATTCCAAGGAGAAGGTTAGCCACAAGGGAAAAGAGGTTGTTGTTTCTGAGAATCCAAACCATGATGGGAAATGGGTGGAAAGAGATTTCTTGAGCCTGAGTGAGACCCGAGAGAATTCTTCAAAGCGATCGGTAGAAGAAGAGGTTGAGAGGGACAGCAATAGGGATAAGAAGCCAAGGCTTGAGACGCTGAATCTCTCTCTTGCTTTGCCTGATGTGTCGCTCTCTCTCACAGCTTCAAACGCCCTTCATAATGGTGATCAACCTGTTAGGCCTAAGCCTAGCAGGCCCTCTGCATCTGCATACTCCAACGATTACACCGCAGCTTCCTTGTCTTACTCTTATTCTCACCCGTTCTCACACAACCCAAGTTGTTCACTTACCCGCAACTCAACTGATAATTTTGAGTATTCTGTGAGCAAAGATGACCAAATTTGGAATTGTGGGGAGGGTACTAATGGTTCTGTTCATAGCAGGTTCAAGCCGATAGGAGATGGGGTTGCTTTGTCCAATCATGGTGGTGGTGGTCTTAGCTCCTTTATGCAAGGTAACAGCCAATTTAAGACTACTAGCTCAGATAACCATTCTTTTTTCCCTTCAGAATTGCCTGCTAGACCAAGGTTTGAGGCCCAGTCAGGGGATTCAAGGGGAAGGAATTCAGAGAATCTGAGAGTGTTGGAAGCATTGGATGGTGGGAAGATGAGGAAGCTCTCTAGGCCTGAGAGGATTCTGAGGGAAATTGTTTCTGAGGCTGTACCTAACATGGCATTGACAATTCAGGAGCTCACTGATGAGGTCATAGCTTCAACAAAGGAGTACTTGAAGAATCTCATCGAGAAGCCTGAGAAGAAAGAGGAATTGGTCAGCCTCCAAAACAGGGTTGAGAGAAGATCTGATCTCACCAAGGAGACTCTTTCTAAGTGCCATAATGTACAAATGCAGATTTTGATTGCTGTCAAGATGGGGCTTGCAAGCTTCTTATCTGGCAAGGTTAATTTACCTGAGATGGTAGAGATTTTCTTGTATAGGAGATGTAGGAATGTGAATTGCAAGAGTCTGCTTCCTGTTGATGACTGTGACTGCAAGATTTGCTCAGGAAATAAGGGCTTTTGCAGTTCTTGCATGTGTCCTATCTGTCTGAACTTTGATTGTGCAAACAACACCTGTAGTTGGATTGGCTGTGATGTTTGTTCCCACTGGTGCCATGCTGCTTGTGGCATTCAGAGGAATCTCATCAAACCTGGGCCTAGTTTGAAGGGACCTTCAGGGACCTCAGAGATGCAATTCCACTGTATTGGCTGTGGACATGCTTCAGAGATGTTTGGGTTTGTAAAAGATGTGTTCATGTGTTGTGCAAAGGATTGGGGCCTAGATACCTTGATGAAAGAGCTTGACTGTGTAAGGAGGATTTTCAGGGGAAGTGAAGATCGCAAAGGGAAGGAATTGCATGTTAAGACTGATGACATGCTGTTAAAGCTTCAAACTAAAATGGTTTCACCTTCAGATGCCTGCAATTACATCACACAGTTTTTCAACTATGTGGATGGCCTCTCAGACTTTCCTGCTTCTGGTATATCTTCGAAGGATTTGGCTCCATCTCAAGCTAATCTTACAAAGGATGCTCCATCTCTTCCAAAGCCTAGTTCCCTAATACCGAAATATACTTATGACATGAGCTATTCAAGGCCACACTCTAGCGCCCTGCCAAATGATCTTCATCAGAAAGACCTCAAAGCTTCCATATTGAGTGAACTAAAAACTGATGCTGATTTCCAGCTGGGGGCTTTACTAAGGAAGGGTGGACTCGAAAGCTTGGAGAGCATCGTGCGGATAAAGGAGGCTGAAGCCAGAATGTTCCAAACCAAAGCAGATGAAGCGAGGAGGGAGGCAGAAGGCTTCCAGAAGATGATCAGGACAAAGACTGCGCAGATGGAAGAGGAGTACGCCGAGAAGCTTGGAAAACTTTGCTTGCATGAGACCGAGGAAACGCGGAGGAAGAAACTGGAGGAACTGAAAGTCCTGGAGAATTCCCATTATGATTACTATAAGATGAAGAAGAGAATGCAAGATGAGATTGATGGTTTATTGCAGAGGATGGAAGCAACAAAGCAGCAATGGGTTTAA 2421 0.4527 MIGGKDLRNGVDSEGENSRSKLSRPNFEPRKEYPDEKGVEFLRDSEVGVGGSVDGALQSKPAMVVVGTSSGLQELTLSYLCDNQKLGLAEKDVPGKSLLNSKEKVSHKGKEVVVSENPNHDGKWVERDFLSLSETRENSSKRSVEEEVERDSNRDKKPRLETLNLSLALPDVSLSLTASNALHNGDQPVRPKPSRPSASAYSNDYTAASLSYSYSHPFSHNPSCSLTRNSTDNFEYSVSKDDQIWNCGEGTNGSVHSRFKPIGDGVALSNHGGGGLSSFMQGNSQFKTTSSDNHSFFPSELPARPRFEAQSGDSRGRNSENLRVLEALDGGKMRKLSRPERILREIVSEAVPNMALTIQELTDEVIASTKEYLKNLIEKPEKKEELVSLQNRVERRSDLTKETLSKCHNVQMQILIAVKMGLASFLSGKVNLPEMVEIFLYRRCRNVNCKSLLPVDDCDCKICSGNKGFCSSCMCPICLNFDCANNTCSWIGCDVCSHWCHAACGIQRNLIKPGPSLKGPSGTSEMQFHCIGCGHASEMFGFVKDVFMCCAKDWGLDTLMKELDCVRRIFRGSEDRKGKELHVKTDDMLLKLQTKMVSPSDACNYITQFFNYVDGLSDFPASGISSKDLAPSQANLTKDAPSLPKPSSLIPKYTYDMSYSRPHSSALPNDLHQKDLKASILSELKTDADFQLGALLRKGGLESLESIVRIKEAEARMFQTKADEARREAEGFQKMIRTKTAQMEEEYAEKLGKLCLHETEETRRKKLEELKVLENSHYDYYKMKKRMQDEIDGLLQRMEATKQQWV* 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2407 806 Pfam PHD - plant homeodomain finger protein 444 568 IPR032881 -
Aev03g2407 806 MobiDBLite consensus disorder prediction 283 297 - -
Aev03g2407 806 CDD PHD_OBE1_like 474 533 - -
Aev03g2407 806 Coils Coil 756 776 - -
Aev03g2407 806 Coils Coil 784 804 - -
Aev03g2407 806 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 554 573 IPR004082 -
Aev03g2407 806 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 481 501 IPR004082 -
Aev03g2407 806 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 435 456 IPR004082 -
Aev03g2407 806 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 741 763 IPR004082 -
Aev03g2407 806 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 396 411 IPR004082 -
Aev03g2407 806 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 702 722 IPR004082 -
Aev03g2407 806 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 357 379 IPR004082 -
Aev03g2407 806 MobiDBLite consensus disorder prediction 181 201 - -
Aev03g2407 806 PANTHER PROTEIN OBERON 3 1 806 - -
Aev03g2407 806 MobiDBLite consensus disorder prediction 9 39 - -
Aev03g2407 806 MobiDBLite consensus disorder prediction 283 318 - -
Aev03g2407 806 Pfam Coiled-coil region of Oberon 669 795 IPR032535 -
Aev03g2407 806 Coils Coil 708 742 - -
Aev03g2407 806 PANTHER VERNALIZATION-INSENSITIVE PROTEIN 3 1 806 IPR004082 -
Aev03g2407 806 MobiDBLite consensus disorder prediction 1 39 - -
Aev03g2407 806 MobiDBLite consensus disorder prediction 136 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g2407 Aev-Chr3 25333008 25336343 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g2407 375 573 PHD Gene Family AT5G57380 24.670 6.50e-10 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g2407 - - gmx:100820216 1344.72