Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2384 ATGAATAATGATAGACCAAAAAGTATAGATAAAGTAGAGCTTACCATCATGCACTTGGATCCATTTGCAGTGGGACCCAACCTGCCGAGGAAATCTTACCAAGATTATCCTTTTGGTCTTCGAAGTCGTCCTTCTTGCGGAGTAGTCGACCTCGGCACCACCGGCGGCAGCTTCCTGAGTGGCTGCGATGACGACGGTGACTACGAGAGCAACGAGGAGGAGGGAGTTGTCATGGATGATGATATGTTGAACATGACCAATTGGGGTTATTATGAACCCTTCAAAGGGAGCCATCTTAATCTGCAGCTCATGCCTGGTATGGCAGATCGTGACACAAAGCCATTTCTGTCTGGTCGCGATCCAACCGTGTTAGTCAGTCCAAATGGAACCTTTAACCCTCGCGATTGCGTTGTCTCTGAAGCGCCTATGCCGATGAACTATGTGAGGGACAGTTGGATCAGCCAGAGAGATAGGTTTTTCAATATGCAGCCTGCAAATCCCAATTATGCAGTTCTTCCAGAAACGTCAGCAACTCCCTCGGCCTCTCAAGCTGTGCAGCCACCCGATACATCGATGGATGAAAAGGCTGATAGAATTGAAGAACCAGTTCAAAAGGAAGGTGGCAAGTCGAAGAAAAGGCAAGCCAGGAGTGCTGCTGCAGTGACTCCAAAAGCCAAGAAACCAAGGAAGCCAAAGGATAATAGCAATGCTCCTGTTCAACGATCAAAGCCCATGAAGACTATGGAGCTTGTGATAAATGGAATTGATATGGACATCTCCGGTTTGCCCATTCCAGTGTGTTCATGTACTGGGACTCCTCAGCAGTGTTATCGGTGGGGATGCGGAGGTTGGCAATCTGCTTGTTGCACCACAAATGTGTCAATTTATCCTTTGCCGATGAGCATGAAGAGGCGCGGTGCAAGGATTGCGGGACGAAAAATGAGCCAGGGTGCTTTTAAGAAGGTTTTGGAGAAACTAGCAGCTGAAGGTTATAATTTTGCTAACCCAATTGATCTGAGGTCTCATTGGGCCAGACACGGCACCAACAAATTCGTCACTATCAGGTAG 1068 0.4785 MNNDRPKSIDKVELTIMHLDPFAVGPNLPRKSYQDYPFGLRSRPSCGVVDLGTTGGSFLSGCDDDGDYESNEEEGVVMDDDMLNMTNWGYYEPFKGSHLNLQLMPGMADRDTKPFLSGRDPTVLVSPNGTFNPRDCVVSEAPMPMNYVRDSWISQRDRFFNMQPANPNYAVLPETSATPSASQAVQPPDTSMDEKADRIEEPVQKEGGKSKKRQARSAAAVTPKAKKPRKPKDNSNAPVQRSKPMKTMELVINGIDMDISGLPIPVCSCTGTPQQCYRWGCGGWQSACCTTNVSIYPLPMSMKRRGARIAGRKMSQGAFKKVLEKLAAEGYNFANPIDLRSHWARHGTNKFVTIR* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2384 355 SMART GAGA_bind_2 78 355 IPR010409 -
Aev03g2384 355 PANTHER PROTEIN BASIC PENTACYSTEINE2-LIKE 78 355 - -
Aev03g2384 355 Pfam GAGA binding protein-like family 78 355 IPR010409 -
Aev03g2384 355 MobiDBLite consensus disorder prediction 191 213 - -
Aev03g2384 355 MobiDBLite consensus disorder prediction 170 244 - -
Aev03g2384 355 MobiDBLite consensus disorder prediction 170 189 - -
Aev03g2384 355 PANTHER - 78 355 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g2384 Aev-Chr3 25213449 25219448 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g2384 78 355 BBR or BPC Transcription factor family AT2G01930 55.960 5.84e-102 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Aev03g2384 GAGA_bind 2.9e-102 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g2384 - - gmx:100791533 475.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g2384 03 25213449 25219448 Aev03g2384 03 25213449 25219448 ECH