Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2377 ATGTCTGTGGTTGCTCCAAGTTCCCTTTTGAAGGTGGAGGAGATACAAGGAAGAGGGAGGGGAATGGTTGCATCTCAACCTCTTAAAGGTGGACAAATTGTCCTCAGAGATTCTCCTATCCTGCTGTATTCTGCCCTGCCCCTGATCTCAAAGTCTTTGTTGTCCTCCTCCTCCTCTGCCTCAGTCTCAGCCTCCTCCTTCTGTGATCACTGCTTCAGAACTTTGCCCCCATCTTTACAGGGAGATTCTTCATCATCCACGGTTTTGTGCCCTTCATGTTGCCATCATCGCTTTTGCAGCTCTAGTTGTCTCACAAAGGCACTGAACTCCTCCCATTCTTCTTGGGTATGTCAAGCATTATCTCGTCTCCGAGCCAATGCTTCACTGCTTGAACAGCCTGACGAGCTCCAAGTTCAGGCTCGTTTCCTCATTGCTGCCTATAATCTCGCCAATGTCTCCCTGTCAGACTTTCAAATTATTCTTTCTCTTCATGGTTCTCCTGATGCTGCTACCGTCGCTGCAGCTCAGTTGCTGCACCCCCTTATTTCATCCCTCTATTCACTCGCTTCCATTAGCCCCCAGAATGGATTTTCTTTGGAGCTCACTTCTGCACTTCTGGCCAAGGACAAGCACAATGCTTTTGGCTTGATGCAGCCGTTCTCTGATGATAATGACCAGAGGTCTGTTCGAGCTTATGGTATCTATCCCTATGCCTCCTTTTTTAACCACGATTGCCTTCCCAATGCCTGCAGATTTGATTATGTGGACACTAATCAACCAGACGACAACCATAACACTGACATTATTATTAGGATGATTCATGATGTTCCCCAAGGTAGGGAGATCTGTTTGAGCTACTTCCCTGTGAATGAAAACTATTCTAGCAGGCAGAAGAGATTGATGGAAGACTATGGCTTCTCCTGTAACTGTGATCGATGTAATGTCGAATCAAATTGGTCCGATAATGACAGTGTTGAAGGTATTGAGGAGGATGAAGACGAGGTTAAGGGTGAAGAAGAGACTATGGATGAGGACCAATATGAAAATATGGCAGCCTCAGATACTGACAATAATCCCAAAGGAGATAATAATGATTTCCCACATGCTTATTTCTTTTTAAAGTACATGTGTGACAGAACAAATTGTGGAGGAACTTTGGCTCCTTCACCCCCTCAGGGTGATACTCCATCTAATGTCATGGAATGTAATGTCTGTGGCAAATTGAAGAGCGATGATGACTTTGAGATTGATGATGAGCAAGATGGAACTGCCATGGAGGACTAA 1284 0.4517 MSVVAPSSLLKVEEIQGRGRGMVASQPLKGGQIVLRDSPILLYSALPLISKSLLSSSSSASVSASSFCDHCFRTLPPSLQGDSSSSTVLCPSCCHHRFCSSSCLTKALNSSHSSWVCQALSRLRANASLLEQPDELQVQARFLIAAYNLANVSLSDFQIILSLHGSPDAATVAAAQLLHPLISSLYSLASISPQNGFSLELTSALLAKDKHNAFGLMQPFSDDNDQRSVRAYGIYPYASFFNHDCLPNACRFDYVDTNQPDDNHNTDIIIRMIHDVPQGREICLSYFPVNENYSSRQKRLMEDYGFSCNCDRCNVESNWSDNDSVEGIEEDEDEVKGEEETMDEDQYENMAASDTDNNPKGDNNDFPHAYFFLKYMCDRTNCGGTLAPSPPQGDTPSNVMECNVCGKLKSDDDFEIDDEQDGTAMED* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2377 427 Pfam SET domain 19 286 IPR001214 GO:0005515
Aev03g2377 427 CDD SET_SMYD 211 313 - -
Aev03g2377 427 Gene3D - 131 213 - -
Aev03g2377 427 MobiDBLite consensus disorder prediction 321 346 - -
Aev03g2377 427 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHR2 2 423 IPR044238 -
Aev03g2377 427 Coils Coil 328 348 - -
Aev03g2377 427 ProSiteProfiles SET domain profile. 8 287 IPR001214 GO:0005515
Aev03g2377 427 SUPERFAMILY SET domain 7 308 IPR046341 -
Aev03g2377 427 Gene3D - 67 126 - -
Aev03g2377 427 MobiDBLite consensus disorder prediction 323 346 - -
Aev03g2377 427 Gene3D SET domain 21 313 IPR046341 -
Aev03g2377 427 SMART set_7 8 293 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g2377 Aev-Chr3 25156002 25157285 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Aev03g2377 SET 2.5e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g2377 - - gmx:100783406 645.195