LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev03g2350	ATGAGGATGATAAGAAAGCTGGTGGAGGACACAAGCATGGGATTCAGCAAGGTACAATTGAGGCCGAGGATAACCGAAATGTCTTTCAACAACATGATGAGAATGGTCTCTGCGAAGAGGAGCTACGGCGGCGGCGAGGACAATGCCATGGATGCGGAGGAAGCGAGGAAATTCAAGGAGATCATAGCGGAGATACTGTCCTTGGTGGACGCGAACAACAAGAGTGATTTCTTGCCTTTCCTGAGGTGGTTTGATTTTGATGGGTTTGTGAAGAAGCTCAAGCGTGTTGGTAAGAGAGCTGATACGTTCTGGCAAGGCCTCCTTGAAGAGCATCGCACTCGCAACAATAATGCTATTCTTCATCATACCATGATTGATCATCTCTTAACTCTTCAGAAAACCCAACCTCACTATTACTCTGACAATATTATCAAAGGCCTTATTCAGGATATGCTCCTTGCCGGAACAAACACAACAATTCTAGCTATCGAGTGGACCATGTCTGCTTTGTTGAATCACCCTGATATACTAAAGAAGGCTAAGGATGAGTTGGATACTAAAATAGGCAAAAATCGCTTGATAGATGAATCTGACCTTCCCAATCTTCCATATCTTAAGAATATTATTTATGAGACACTTCGATTGTATTCTCCAAGTCCATTGTTATTGCCCCATTTTTCTTCGGATGAATGCAATGTTGGGGGATTCACAATTCCACGTGACTCCATACTGTTGATTAATTCATGGGCTATTCGAAGAGATCCAAAAATTTGGAATGATGCTGAATGTTTCAAGCCCGAGAGGTTTGAAAAAGAAGGAGAGACAAATAAATTAATAACATTTGCATTTGGATTAGGGAAAAGGGCATGTCCTGGATCAATATTGGCACATCGTTTGATGGGCATGACTCTGGGATTATTGATTCAATGCTTTGAATGGAAACAATTGAACGATAAAGAGATTGATATGAGGGAGGATAAAGGATTCACTTTTGGAAAGCTAATTCCGTTAGAGGCCTTGTGTAAAGCATTGCCTATCAGCATGACAGTCGAAGCTGCATAA	1062	0.4162	MRMIRKLVEDTSMGFSKVQLRPRITEMSFNNMMRMVSAKRSYGGGEDNAMDAEEARKFKEIIAEILSLVDANNKSDFLPFLRWFDFDGFVKKLKRVGKRADTFWQGLLEEHRTRNNNAILHHTMIDHLLTLQKTQPHYYSDNIIKGLIQDMLLAGTNTTILAIEWTMSALLNHPDILKKAKDELDTKIGKNRLIDESDLPNLPYLKNIIYETLRLYSPSPLLLPHFSSDECNVGGFTIPRDSILLINSWAIRRDPKIWNDAECFKPERFEKEGETNKLITFAFGLGKRACPGSILAHRLMGMTLGLLIQCFEWKQLNDKEIDMREDKGFTFGKLIPLEALCKALPISMTVEAA*	354

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aev03g2350	353	PANTHER	CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 2-RELATED	2	345	-	-
	Aev03g2350	353	ProSitePatterns	Cytochrome P450 cysteine heme-iron ligand signature.	283	292	IPR017972	GO:0005506\|GO:0016705
	Aev03g2350	353	Gene3D	Cytochrome P450	1	338	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Aev03g2350	353	SUPERFAMILY	Cytochrome P450	14	339	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Aev03g2350	353	Pfam	Cytochrome P450	17	329	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Aev03g2350	353	PRINTS	P450 superfamily signature	281	290	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Aev03g2350	353	PRINTS	P450 superfamily signature	154	171	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Aev03g2350	353	PRINTS	P450 superfamily signature	207	218	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Aev03g2350	353	PANTHER	FLAVONOID 3'-MONOOXYGENASE-RELATED	2	345	-	-
	Aev03g2350	353	PRINTS	E-class P450 group I signature	280	290	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev03g2350	Aev-Chr3	24988286	24989602	Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aev03g2350	2	346	Cytochrome P450	AT4G37340	51.734	1.06e-129	379

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev03g2350	K13260		-	gmx:100784120	480.715

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