Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2339 ATGGCTACTTTCACAACTGGTTCTTATGACCCTGATGAGCTTCGGCCTCCTACTCGTCAATCTGCTGCATCATCGAAAGTGTGTCGAGTTTGCGGTGATCAGATTGGATACAGGGAAGATGGGAAGTTGTTTGTGGCATGTAATGTGTGTGGTTTCCCTGTTTGCCGACCCTGTTATGAGTATGAGAGGAGTGATGGCACTCAATGCTGCCCTCAATGTAACACTCGCTATAAGCGTCACAAAGGTTCTCCTAGAGTAGTTGGAGATGAAGAGCAGAACTTTGATGCTGATGATTTTGATGATGAGTTTCAGATTATTAAGAGGGACCATGATGATCCAGAACAGCAACATGATGATGTTAATTCCGTGGAAAATAGAGACAACAAGGAGCAGCAGTGGAATCCCAATGCTCTGGTTTTTTCTTCAGCTGGAAGTGTTGCTGGTAAGGACTTGGAAGGGGAGAAAGAGTTCTACAGCAATGCAGAATGGGAAGAAAGAGTAGAGAAATGGAAAGTGAGGCAAGAAAAGAGAGGCCTGGTTAACAAAGAGGAAGATAAAGTAGAAGACCAAGCCGAAGAAGATGAATACCTTATGGCTGAAGCTAGGCAACCATTGTGGCGAAAGGTTCCAATACCTTCAAGCCTAATCAACCCGTATCGCATAGTCATAGTGATGAGGCTTGTGATCTTAGCTTTCTTCTTGCGGTTCCGAATCATGACTCCAGCATATGATGCATATCCACTGTGGCTCACATCTGTGATATGTGAGATATGGTTTGCACTCTCATGGATACTTGACCAGTTCCCTAAATGGTTCCCCATCACGCGCGAGACTTACTTGGACCGCTTGTCCATACGGTTTGAGCGCGAAGGGGAACCAAACAAACTGGCCCCTGTTGATGTCTTTGTGAGTACTGTGGACCCTTTGAAGGAACCACCAATCATAACAGCCAACACTGTTCTTTCAATCCTCTCTGTGGATTACCCTGTTGACAAGGTTTGCTGCTATGTGTCTGACGATGGTGCTTCCATGCTTCTCTTTGATACACTCTCTGAGACTTCTGAGTTTGCAAGAAGATGGGTTCCTTTTTGCAAGAAGTATAGCATAGAGCCAAGGGCTCCTGAGTTCTATTTCTCTCAGAAAATTGATTACTTGAAAGACAAGGTTCACCCCACTTTTGTGAAGGAACGTAGGGCCATGAAGAGAGAATATGAAGAATTCAAAGTGAAAATTAATGCTTTGGTGGCAAAGGCTCAGAAGAAACCAGAGGAAGGGTGGGTGATGCAGGATGGTACCCCATGGCCTGGGAACAACACTCGTGATCATCCAGGAATGATTCAGGTATATTTAGGAACGGCTGGTGCACTTGACGTGGAAGGAAAGGAACTGCCACGACTTGTGTATATTTCGCGAGAAAAACGCCCCGGCTATCAACACCACAAGAAAGCTGGTGCCATGAATGCTTTAGTTCGAGTTTCTGCTGTACTTACAAATGCACCATTCATGCTGAATCTGGATTGTGACCATTACATCAACAATAGCAAGGCCATAAGAGAGGCTATGTGCTTTTTAATGGACCCCCAGCTTGGGAAGAAGCTCTGCTATGTTCAGTTTCCACAAAGATTCGATGGTATTGATCGACATGATCGATATGCTAACCGTAACACTGTATTCTTTGATATCAATATGAAAGGCCTAGATGGGATTCAGGGCCCGGTTTATGTCGGTACCGGAACCGTGTTCAATAGACAGGCATTGTATGGATATGATCCACCAGTTTCTGAGAAAAGGCCAAAGATGACATGTGATTGCTGGCCATCATGGTGCTGCTGCTGCTGTTGTGGTGGTTCAAGGAAAACCAAGTCCAAAAAGAAATCATCATCATCAGGAAGAGGCCTCTTCAGTAGATTGTACTCCAGGAAGAAGAAAATGATGGGGAAGGACTACGTCAGGAAAGGGTCTGAGCCAATGTTTGATCTTGAAGAGATTGAAGAAGGGCTCGAAGGCTTCGATGAGCTAGAGAAGTCATCCCTCATGTCCCAGAAACAATTCGAGAAACGATTCGGTCAGTCACCAGTTTTCATTGCTTCAACGTTAATGGAAAATGGTGGACTTCCTGAAGGCACCAACAGTCAATCACTTATTAAGGAAGCTATTCATGTTATAAGCTGTGGCTATGAAGAGAAGACTGAATGGGGAAAAGAGATTGGGTGGATTTATGGCTCAGTCACAGAAGACATTTTAACAGGTTTTAAGATGCACTGCAGAGGGTGGAAATCAGTATACTGCATGCCTAAAAGAGCAGCTTTTAAGGGATCTGCTCCAATTAATCTATCAGATAGGTTGCACCAAGTTCTGAGATGGGCTCTTGGTTCTGTTGAAATTTTCCTTAGTAGACATTGTCCTTTATGGTATGGCTATGGAGGAAAGCTCAAGTGGCTAGAGAGGCTAGCTTATACTAACACTATAGTGTATCCACTCACTTCCGTCCCTCTTCTTGCATATTGCATTATTCCAGCTGTGTGTCTTCTCACTGGAAAGTTCATCATCCCTACTTTGACCAACCTTGCTAGTGTGTGGTTTATGGCTCTATTCATCTCCATCATTCTAACTGGTGTGCTAGAGCTAAGGTGGAGTGGTGTCAGCATTGAAGACTGGTGGCGAAACGAGCAATTCTGGGTCATTGGAGGCGTATCAGCACACCTTTTTGCTGTGTTCCAAGGCCTCCTCAAAGTCCTTGGAGGAGTTGACACAAACTTCACAGTCACAGCAAAAGCAGCAGATGATGCTGAGTTTGGTGAGCTCTACCTATTCAAGTGGACAACACTTCTGATCCCACCCACCACACTCATAATCCTGAACATGGTTGGAGTTGTGGCTGGTGTCTCTGATGCAATCAACAATGGTTATGGCACATGGGGGCCTTTGTTTGGGAAGCTATTCTTTGCATTTTGGGTCATTGTGCATCTTTATCCTTTCCTGAAAGGTCTTATGGGAAGACAAAACAGGACTCCTACTATTGTAGTTCTGTGGTCTATTCTTCTGGCATCCATTTTCTCATTGATTTGGGTGAGAATTGATCCTTTCTTGCCTAAGCAAACTGGTCCAATACTCAAACAGTGTGGAGTAGAATGCTGA 3138 0.4452 MATFTTGSYDPDELRPPTRQSAASSKVCRVCGDQIGYREDGKLFVACNVCGFPVCRPCYEYERSDGTQCCPQCNTRYKRHKGSPRVVGDEEQNFDADDFDDEFQIIKRDHDDPEQQHDDVNSVENRDNKEQQWNPNALVFSSAGSVAGKDLEGEKEFYSNAEWEERVEKWKVRQEKRGLVNKEEDKVEDQAEEDEYLMAEARQPLWRKVPIPSSLINPYRIVIVMRLVILAFFLRFRIMTPAYDAYPLWLTSVICEIWFALSWILDQFPKWFPITRETYLDRLSIRFEREGEPNKLAPVDVFVSTVDPLKEPPIITANTVLSILSVDYPVDKVCCYVSDDGASMLLFDTLSETSEFARRWVPFCKKYSIEPRAPEFYFSQKIDYLKDKVHPTFVKERRAMKREYEEFKVKINALVAKAQKKPEEGWVMQDGTPWPGNNTRDHPGMIQVYLGTAGALDVEGKELPRLVYISREKRPGYQHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHYINNSKAIREAMCFLMDPQLGKKLCYVQFPQRFDGIDRHDRYANRNTVFFDINMKGLDGIQGPVYVGTGTVFNRQALYGYDPPVSEKRPKMTCDCWPSWCCCCCCGGSRKTKSKKKSSSSGRGLFSRLYSRKKKMMGKDYVRKGSEPMFDLEEIEEGLEGFDELEKSSLMSQKQFEKRFGQSPVFIASTLMENGGLPEGTNSQSLIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWKSVYCMPKRAAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYGYGGKLKWLERLAYTNTIVYPLTSVPLLAYCIIPAVCLLTGKFIIPTLTNLASVWFMALFISIILTGVLELRWSGVSIEDWWRNEQFWVIGGVSAHLFAVFQGLLKVLGGVDTNFTVTAKAADDAEFGELYLFKWTTLLIPPTTLIILNMVGVVAGVSDAINNGYGTWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVLWSILLASIFSLIWVRIDPFLPKQTGPILKQCGVEC* 1046
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2339 1045 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 11 102 IPR013083 -
Aev03g2339 1045 MobiDBLite consensus disorder prediction 1 20 - -
Aev03g2339 1045 Pfam Cellulose synthase 299 1038 IPR005150 GO:0016020|GO:0016760|GO:0030244
Aev03g2339 1045 MobiDBLite consensus disorder prediction 109 131 - -
Aev03g2339 1045 MobiDBLite consensus disorder prediction 109 126 - -
Aev03g2339 1045 CDD mRING-HC-C4C4_CesA_plant 26 76 - -
Aev03g2339 1045 PANTHER CELLULOSE SYNTHASE A CATALYTIC SUBUNIT 3 [UDP-FORMING]-RELATED 154 1045 - -
Aev03g2339 1045 PANTHER CELLULOSE SYNTHASE A CATALYTIC SUBUNIT 3 [UDP-FORMING]-RELATED 17 114 - -
Aev03g2339 1045 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 154 1045 - -
Aev03g2339 1045 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 17 114 - -
Aev03g2339 1045 Coils Coil 397 417 - -
Aev03g2339 1045 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 405 591 IPR029044 -
Aev03g2339 1045 SUPERFAMILY RING/U-box 20 94 - -
Aev03g2339 1045 SUPERFAMILY Nucleotide-diphospho-sugar transferases 313 823 IPR029044 -
Aev03g2339 1045 Pfam Zinc-binding RING-finger 23 93 IPR027934 -
Aev03g2339 1045 Coils Coil 173 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g2339 Aev-Chr3 24917960 24922850 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g2339 2 1045 Cell Wall Biosynthesis AT5G17420 66.199 0.0 1439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g2339 K10999 - gmx:100780354 1860.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g2339 03 24917960 24922850 Aev03g2339 03 24917960 24922850 ECH