Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2336 ATGGCTGAATCTCCCATACCTATTACTGCTGATGATGAGCATGATCATGGTGGCGGTGGTTCCGATTGGGTGGTTCTAGTGGCGGGCATTACGTGTGCCTTGCTGTGTGCGGTAGGGCTGAACAGCATGTTACGGCGATGCGTGTTTGAGTGTGCTAGTCGTGTGGTGAGGGAGCCTCTTCAGTCTCGCAGAATGAATTGTGGGCTGAAGAAGCAGGAAATGCTAGCTCTGCCAACCTCAACTTATCATCATAATTATAATAGTAGTAGTAGTAGTTGTGCAATATGCTTGGTGGATTTGAGAGATGGGGAGGAGATAAGGTTGCTTCCACAGTGCAATCACCGCTTCCATGTGCTTTGCATTGACAAGTGGCTCCTCTCTCATTCTTCTTGTCCTACTTGCAGGCACCTCCTCAACCACAACAATAATCATTCCATTCCATGA 444 0.4797 MAESPIPITADDEHDHGGGGSDWVVLVAGITCALLCAVGLNSMLRRCVFECASRVVREPLQSRRMNCGLKKQEMLALPTSTYHHNYNSSSSSCAICLVDLRDGEEIRLLPQCNHRFHVLCIDKWLLSHSSCPTCRHLLNHNNNHSIP* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2336 147 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 55 140 IPR013083 -
Aev03g2336 147 Pfam Ring finger domain 92 135 IPR001841 -
Aev03g2336 147 PANTHER OS06G0666500 PROTEIN 19 140 - -
Aev03g2336 147 ProSiteProfiles Zinc finger RING-type profile. 93 135 IPR001841 -
Aev03g2336 147 SMART ring_2 93 134 IPR001841 -
Aev03g2336 147 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 19 140 - -
Aev03g2336 147 SUPERFAMILY RING/U-box 77 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g2336 Aev-Chr3 24907659 24908102 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g2336 21 139 C3H Transcription Factor Family AT2G17450 46.094 2.25e-30 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g2336 - K19040 cam:101507208 166.777