Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2295 ATGGCAAAAAGGGCAAAAGGGTCTCACTCTGAGAAGAACAGGTCTCTCTCATCATCACCATCTGCCCCTGCGTCTGACCGCAAACTGGTTTTGAGGATTAAATCTACTGAGGGAATGAAGAGATCGGTGCTGCAGACTAATTCGAGAAAGAAACCCAAATCGAAGCAGAAGAAACTGAAAATTGATGCTAAGAAGCCAAAGAAACCTCCAACTGCTTTCTTCTACTTCTTGGAGGATTTTCGAAAAGAATTTCAAGAGCAGAATCCCGATGTCAAATCAATGCGTGAAATTGGCAAGGCATGCGGAGAGAAGTGGAAAACAATGACTTATGAGGAGAAGGTTCAATACTATGATATAGCAACAGAAAAACGTGCAGAATTTGACATGGCAATGGCAGAATTTAACAAGAAAATGGAAAACGGTGAATTTGAAGAAACTGATGAGGATTCAGAGTTTGAAGGGTAA 465 0.4108 MAKRAKGSHSEKNRSLSSSPSAPASDRKLVLRIKSTEGMKRSVLQTNSRKKPKSKQKKLKIDAKKPKKPPTAFFYFLEDFRKEFQEQNPDVKSMREIGKACGEKWKTMTYEEKVQYYDIATEKRAEFDMAMAEFNKKMENGEFEETDEDSEFEG* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2295 154 Pfam HMG (high mobility group) box 66 135 IPR009071 -
Aev03g2295 154 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 66 135 IPR009071 -
Aev03g2295 154 SUPERFAMILY HMG-box 57 140 IPR036910 -
Aev03g2295 154 Gene3D High mobility group box domain 59 150 IPR036910 -
Aev03g2295 154 CDD HMGB-UBF_HMG-box 66 132 - -
Aev03g2295 154 SMART hmgende2 65 136 IPR009071 -
Aev03g2295 154 MobiDBLite consensus disorder prediction 46 64 - -
Aev03g2295 154 MobiDBLite consensus disorder prediction 1 66 - -
Aev03g2295 154 PANTHER HIGH MOBILITY GROUP B PROTEIN 14 1 153 - -
Aev03g2295 154 PANTHER HIGH MOBILITY GROUP B PROTEIN 12-RELATED 1 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g2295 Aev-Chr3 24627524 24629940 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Aev03g2295 HMG_box 1.3e-17 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g2295 - - gmx:100809401 194.126