Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2248 ATGGAGATGAGTAGTAGTAAGGACAGGTTTGAAGGTGATTTGAGTGACATAGTCCGTGCTAGCTATGGGAGGTGTAGCACAGTGACAGCAGGCGCTTGTACCTCATCATCTGAAGCTGATTCCTTCTCTCATCATCATCATGAGTGGATGTTGGTTTCTGATCCCTCCATGGAGGATTTGGATTTGGATTTGGATTTGTCTTGTGTTTTGGATCAAGAGCATAGGGGCAGCTTCGGTGATCCATTCTCCAACATGACAGATCCCTTTCTTCTACAACATCATCATAATAATACTATCAATATGCCAGCTGCAGCTGCTGCTGCACCCTACTACTTCAACAACAGCAGATCCCCATCCTCATCTGCTGTTATTGGAAGTGGTGATAATAATAATTGTGTTGCTGAGGATGATGATAATATTTTTATGATGATGAGAAGGGCGCCTAGTTATTGTAATAACAATAATAATAATAATATGATATTGTCAAACATGATTCAGATCTCTCCCAAACCCACCAAGCTACCCTTCTCCTCCTCAACATGTTGTGATGCTGCTGCTGCAAGCACCTCTTCTAATAATAAAGATCATGGCTTGTTGGTGGAGCACAACAACACAGGAGCAGCACTAGTTCAGATCTCATCTTCTCCAAGGAATAATAATCCAGCAGCAGCTGCTCTTAAGCGAAGGAAAAGCCAGGCAAAGAAGTCGATTTGTATTCCTGCACCAACAGCGCCAAACAGCAGCAGACAAAGTGGGGAGGTAGTTCCTTCAGATCTGTGGGCTTGGAGAAAATACGGTCAGAAACCCATTAAAGGTTCTCCATATCCAAGGGGCTATTATAGATGCAGCAGCTCAAAGGGTTGCCCTGCAAGGAAACAAGTAGAGAGGAGCAGAACAGAGCCAAACATGTTGGTGATTACATACACTTGTGAGCACAACCATCCCTGGCCTACTCAGAGAAACGCTCTTGCTGCCTCATCCCGCTCCCATCCATCCAAGACCATCCATTCTCATTCTGCTTCTTCAAACAAGATCAATTCTTTGCCCCAAGAAGAGGAACAAGATCAGAGCAACATCAGCACTGACAACTCAGCAAACAATGGATCATCTGTGAAGTTGGAAGAGATCGATGATGGCATGATGGAGATGGATATATGGTGA 1161 0.4419 MEMSSSKDRFEGDLSDIVRASYGRCSTVTAGACTSSSEADSFSHHHHEWMLVSDPSMEDLDLDLDLSCVLDQEHRGSFGDPFSNMTDPFLLQHHHNNTINMPAAAAAAPYYFNNSRSPSSSAVIGSGDNNNCVAEDDDNIFMMMRRAPSYCNNNNNNNMILSNMIQISPKPTKLPFSSSTCCDAAAASTSSNNKDHGLLVEHNNTGAALVQISSSPRNNNPAAAALKRRKSQAKKSICIPAPTAPNSSRQSGEVVPSDLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSRTEPNMLVITYTCEHNHPWPTQRNALAASSRSHPSKTIHSHSASSNKINSLPQEEEQDQSNISTDNSANNGSSVKLEEIDDGMMEMDIW* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2248 386 SMART WRKY_cls 256 316 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev03g2248 386 ProSiteProfiles WRKY domain profile. 251 317 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev03g2248 386 PANTHER WRKY TRANSCRIPTION FACTOR 14-RELATED 11 367 - -
Aev03g2248 386 SUPERFAMILY WRKY DNA-binding domain 254 317 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aev03g2248 386 MobiDBLite consensus disorder prediction 322 371 - -
Aev03g2248 386 Gene3D WRKY domain 244 318 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aev03g2248 386 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 11 367 IPR044810 GO:0003700
Aev03g2248 386 MobiDBLite consensus disorder prediction 322 386 - -
Aev03g2248 386 Pfam WRKY DNA -binding domain 258 315 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g2248 Aev-Chr3 24388136 24390580 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g2248 8 325 WRKY Transcription Factor Family AT2G34830 44.379 8.31e-66 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aev03g2248 WRKY 5.7e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g2248 - - gmx:100776919 286.574
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g2248 03 24388136 24390580 Aev03g2248 03 24388136 24390580 ECH