Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2217 ATGGATAAAGGCAAAGCAGTTGCAGTAGCAGTAGAAGAGCCATTCAGCGCCAACACCACCACCCCTCCTACGCCGCAGATTCCTGCATTTTCCGGCAAAGATGCCTATCTGTGGGTCACCCGAGTTGATAATATAATTAAATACTTCCAAGCCAATCCCACCATGAACGACGGCGACAAAGTGCAAGCCGTCATAGCCGCTTTCAAAGGAACCGCCTCCACATGGTTCCACCTCTACTGGAAGGTGTACAACGCCACGCCCCTCACTTGGCCCACTCTCAAGAACGCCGTCCTGCACCGCTTCCAGCCGGAGGCCGTCAATAACCCCATACTGGTGCTCCTCAACATCCGTCAGACCGGCACCCTTGCGGAGTACCGCGACCTCTTCGAAACGCTCACTCACTCTCAACCGCTGCGCTCACCCTCGCCCCACCTGACCCTCAGCGACGAGACGTTGAGGGCTATTTTTCTCAACGGCCTTAAGGAGGATCTGAAGGTGCAGCTGAAGTCGCGCGAGGTGAAGTTCCTCTCGGATTTGATGTGCATGGCTCAGCTGATTGAAGATAGAAGAGAGGACGGCAGAGATCAGGAAAGAGGGGCCAAGTTGATGAAGTTGTGGGGGAAGGTCTTCGGGAGAGAAGTGATCGTACTGGTGGCAAGCGGTGCTTCCCACAGCCTGATCGCGAGTAGGCTGGTGAAGGAGATGGGGTTATTGGTGTCTGAATGTGATGATGATGATGAGGCTTTTGTATTTTGGGATGGGCCACCAGTGAAGAGCCAAGGCACGTGTAGACGGGTGTTGGTTAAGGTGCATGAGGACTTGCCCGAAATGGTGCATGATTTCTTTGTCTTCGAGGATCTTGGAGGGAATCAACAGGTTGTGCTGGGGTTTGATTGGCTACTCAGGCTTGGAAAAGTCTCTGCCAACTACACTAATTTGACCATGAAATTATTTGTGGCTTCTGGCGCAGAACTCTCCTCCGATCCCGATCAGCACTTTCCCACCGCCGTCACCATGGTGAACGTTCCGAAGACAAAGAAGACATACTGCAAGAGCAAGGAGTGCAGGAAGCACACACTGCACAAGGTGACCCAATACAAGAAGGGTAAGGATAGCATTGCTGCTCAGGGCAAGCGCCGTTATGATCGTAAACAGTCCGGTTATGGTGGTCAGACCAAGCCCGTCTTCCACAAGAAGGCAAAAACCACCAAGAAAATTGTGTTGAGGCTTCAGTGCCAGGGTTGCAAGCATGTCTCCCAGCACGCTATCAAGAGGTGCAAACACTTTGAGATTGGTGGTGACAAGAAGGGAAAAGGAACCTCCCTCTTCTAG 1332 0.5248 MDKGKAVAVAVEEPFSANTTTPPTPQIPAFSGKDAYLWVTRVDNIIKYFQANPTMNDGDKVQAVIAAFKGTASTWFHLYWKVYNATPLTWPTLKNAVLHRFQPEAVNNPILVLLNIRQTGTLAEYRDLFETLTHSQPLRSPSPHLTLSDETLRAIFLNGLKEDLKVQLKSREVKFLSDLMCMAQLIEDRREDGRDQERGAKLMKLWGKVFGREVIVLVASGASHSLIASRLVKEMGLLVSECDDDDEAFVFWDGPPVKSQGTCRRVLVKVHEDLPEMVHDFFVFEDLGGNQQVVLGFDWLLRLGKVSANYTNLTMKLFVASGAELSSDPDQHFPTAVTMVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSIAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHAIKRCKHFEIGGDKKGKGTSLF* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2217 443 CDD retropepsin_like 205 300 - -
Aev03g2217 443 PANTHER 60S RIBOSOMAL PROTEIN L44-LIKE 320 443 - -
Aev03g2217 443 MobiDBLite consensus disorder prediction 372 394 - -
Aev03g2217 443 ProSitePatterns Ribosomal protein L44e signature. 401 412 IPR000552 GO:0003735|GO:0005840|GO:0006412
Aev03g2217 443 Gene3D Acid Proteases 182 322 IPR021109 -
Aev03g2217 443 PANTHER 60S RIBOSOMAL PROTEIN L36A/L44 320 443 IPR000552 GO:0003735|GO:0005840|GO:0006412
Aev03g2217 443 Pfam Retroviral aspartyl protease 209 302 - -
Aev03g2217 443 Pfam Retrotransposon gag protein 66 162 IPR005162 -
Aev03g2217 443 Pfam Ribosomal protein L44 357 432 IPR000552 GO:0003735|GO:0005840|GO:0006412
Aev03g2217 443 MobiDBLite consensus disorder prediction 372 386 - -
Aev03g2217 443 Gene3D - 339 443 - -
Aev03g2217 443 SUPERFAMILY Zn-binding ribosomal proteins 340 432 IPR011332 GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g2217 Aev-Chr3 24225585 24228652 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g2217 339 443 Cytoplasmic Ribosomal Protein Gene Family AT3G23390 91.429 1.72e-64 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g2217 K02929 - han:110877507 224.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g2217 03 24225585 24228652 Aev04g0832 04 5088447 5089185 PCT