Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2213 ATGGGAGATAACAATGTGAACCTTCCACCCGGGTTTCGGTTTTATCCAACTGATGAAGAGCTTGTAGTCCATTTCCTTCATAGAAAGGCAGCACTTCTTCCTTGCCACCCTGATGTCATACCTGATCTTGACCTCTACCCTTTTGATCCATGGGAGCTAGATGGTAGAGCTTTGGCAGAGGGAAACCAATGGTACTACTATAGCAGAAGAACACAGAATAGAGTCACTGCCAATGGTTATTGGAATCCAATGGGAATGGAAGAGCCAGTGGTTTCAAGCTCAAGCAACAAGAGAGTTGGTATGAAGAAATTTTTTGTGTTCTATGTGGGAGAAGCCCCTGATGGTAACAGAACCAATTGGATAATGCAAGAGTATCGTCTATCAGATTCTGCATCCTCTAGCAGATCATCCAAAAGAAAATCACAACCAAAAACAGACTACAGTAAGTGGGTGATATGCCGAGTTTATGAGCGTGATGAGAATGATGATGGTGATGGAACAGAGCTCTCTTGTTTGGATGAAGTTTTCTTGTCATTGGATGATCTTGATGAGATTAGCTTGCCAAATTAG 570 0.4246 MGDNNVNLPPGFRFYPTDEELVVHFLHRKAALLPCHPDVIPDLDLYPFDPWELDGRALAEGNQWYYYSRRTQNRVTANGYWNPMGMEEPVVSSSSNKRVGMKKFFVFYVGEAPDGNRTNWIMQEYRLSDSASSSRSSKRKSQPKTDYSKWVICRVYERDENDDGDGTELSCLDEVFLSLDDLDEISLPN* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2213 189 PANTHER NAC TRANSCRIPTION FACTOR 56 5 186 - -
Aev03g2213 189 Pfam No apical meristem (NAM) protein 9 127 IPR003441 GO:0003677|GO:0006355
Aev03g2213 189 Gene3D NAC domain 17 162 IPR036093 GO:0003677|GO:0006355
Aev03g2213 189 ProSiteProfiles NAC domain profile. 8 158 IPR003441 GO:0003677|GO:0006355
Aev03g2213 189 SUPERFAMILY NAC domain 5 157 IPR036093 GO:0003677|GO:0006355
Aev03g2213 189 PANTHER NAC DOMAIN-CONTAINING PROTEIN 104 5 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g2213 Aev-Chr3 24207859 24208672 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g2213 1 161 NAC Transcription Factor Family AT1G61110 41.667 5.98e-44 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aev03g2213 NAM 2.9e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g2213 - - gmx:100813096 349.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g2213 03 24207859 24208672 Aev04g0830 04 5073979 5074741 PCT