Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2211 ATGGAAAGCGCGCGAAGCAGCGGAAAGATGAAGAGTCACAAGGTGAGAGCATCGAACGACGAAAATGTTTCGCCGCTGCAGATGGCGATGGAAGATCAAAGAGGACGCTACCTCCAATCGATGACGATGAGTCCAAAATTCCAACAGTTTGCCGAGAACATCGACGTCGGCTCGCCGCTCGTGAGATACTTATTCACCGGATCTCCGATCTCCGGAAAGGTCGTGACCGCCGGCGATGCCTTCAGTTCGCCGACGTTCGGCTCCAGCAAATATAGGTCCGCGAAATCGCAACAGTACAGCGGCAGCAGTTCGGGTAATAGCAGCAGCTTCGGTCGTCGCGGAAGACTGTCCCTCTCGCCGCTCTCTTCGGTGGAGAACTTAGAAATGTCGCAGCTTAAGTCGCCGCCGATGTACGGAACACCAGTGAAGGTGGATGAGGAAGTTCTTGTGATGGATGACATTCTGGTGAGGTCAACGCCGGGGGGAGGAAAGAACGGAAGGTCTTCATCGTCTTCCTCAGGGCGTGGTTCTTCGTCTTCCTCGTCGTCATCGTCGCCGTGGCTGAAGAGCGTGCTCAAGACGGATGTTTGCAGAGCATGGGATGAATCTGGAAACTGCCGCAATAACTCCAAAAGCCAGTTTGCACATGGAAAAGAAGAGAATCATCCAACTCGTTTCTCCATGAAGTCCAAATCTGAGACAGAGACGGGGAAATCACCTTTGAGTGCAGGGTCAGGTGTATATGGCTCAGATTGCCATACCGTGTATCAGCAGCACCATGTAGCAGCTGAATCTGGGGTCACAACATCTCAACCAGCTACACCAGTTAAACTTGAACCTGGCCGCAGTGCCCTTGCCCTTGCCAATGCCAATACTGCTGCTAGTTCACGTGACTGGTCACCCCTGGATGATGGCATTGAGGTTGTCCTCCCAAATGGTTCAGATAAAGCTCCATCGAGGGAAGAAGTTGATTCACATATTGCCAGTCTCCTCCTCCTCCATGCAGCAGCTAAACACAGACTACCAGTATTCGTAAAACTCTGCGAGGAGGGAGCATGA 1059 0.5241 MESARSSGKMKSHKVRASNDENVSPLQMAMEDQRGRYLQSMTMSPKFQQFAENIDVGSPLVRYLFTGSPISGKVVTAGDAFSSPTFGSSKYRSAKSQQYSGSSSGNSSSFGRRGRLSLSPLSSVENLEMSQLKSPPMYGTPVKVDEEVLVMDDILVRSTPGGGKNGRSSSSSSGRGSSSSSSSSSPWLKSVLKTDVCRAWDESGNCRNNSKSQFAHGKEENHPTRFSMKSKSETETGKSPLSAGSGVYGSDCHTVYQQHHVAAESGVTTSQPATPVKLEPGRSALALANANTAASSRDWSPLDDGIEVVLPNGSDKAPSREEVDSHIASLLLLHAAAKHRLPVFVKLCEEGA* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2211 352 MobiDBLite consensus disorder prediction 81 115 - -
Aev03g2211 352 MobiDBLite consensus disorder prediction 207 244 - -
Aev03g2211 352 ProSiteProfiles Zinc finger C3H1-type profile. 192 219 IPR000571 GO:0046872
Aev03g2211 352 MobiDBLite consensus disorder prediction 1 26 - -
Aev03g2211 352 MobiDBLite consensus disorder prediction 156 187 - -
Aev03g2211 352 MobiDBLite consensus disorder prediction 162 187 - -
Aev03g2211 352 PANTHER CCCH ZINC FINGER/TIS11-RELATED 5 347 IPR045877 GO:0003729
Aev03g2211 352 MobiDBLite consensus disorder prediction 76 115 - -
Aev03g2211 352 Gene3D - 188 223 - -
Aev03g2211 352 PANTHER ZINC FINGER C-X8-C-X5-C-X3-H TYPE PROTEIN 5 347 - -
Aev03g2211 352 MobiDBLite consensus disorder prediction 213 232 - -
Aev03g2211 352 MobiDBLite consensus disorder prediction 1 18 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g2211 Aev-Chr3 24191707 24194096 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Aev03g2211 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g2211 K18753 - gmx:102661448 255.758