Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2203 ATGGATGCTTTATCCTTAAGCTCAAGCCTAAGCATTTCAAAGCCATTTCAATGGCTTCCACTATCAAGCAAGCAGCAAAGGACTCCTTCACATCTTCACCTTAATGTTTCATGCAGAGCCACAAAGCTGAATTGTTTGGAATATGATACTAACAAATGCAACTTGTACAAGATGCTATCTCTGAGTCCCAAAAGTGCAACCAGTGATGAGATTAAGAGAGCATACAGATCAATGGCACTTCAGTACCATCCTGATGTCTGCCATGACCCTTCCATGAAGGAGCAGTCAACAAAGATTTTTGTGCAGCTCAATGATGCTTACAAGACCTTGTCTAATCCAATGCTTAGAGCACAGTATGATTCTGAATTGGGTTTGGGAAGCAAAGTCAATGTTAGTTATGAAACTTGTTGTGATGATGATGGTGAGAGTTTGAGGAGTAGGTGGCAGGAGCAAGTGGTGGTTGAGTTGAAGACAAGGTCTCGTAGAAGAATGGAACAAAAGGGAGGATCATGGAGCAGCAGAATGAGGACACAGAACAGGAAAAATAGGAACTGA 555 0.4198 MDALSLSSSLSISKPFQWLPLSSKQQRTPSHLHLNVSCRATKLNCLEYDTNKCNLYKMLSLSPKSATSDEIKRAYRSMALQYHPDVCHDPSMKEQSTKIFVQLNDAYKTLSNPMLRAQYDSELGLGSKVNVSYETCCDDDGESLRSRWQEQVVVELKTRSRRRMEQKGGSWSSRMRTQNRKNRN* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2203 184 SMART dnaj_3 53 115 IPR001623 -
Aev03g2203 184 Pfam DnaJ domain 54 120 IPR001623 -
Aev03g2203 184 ProSiteProfiles dnaJ domain profile. 54 123 IPR001623 -
Aev03g2203 184 MobiDBLite consensus disorder prediction 158 184 - -
Aev03g2203 184 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 3 183 - -
Aev03g2203 184 PRINTS DnaJ domain signature 95 115 IPR001623 -
Aev03g2203 184 PRINTS DnaJ domain signature 75 90 IPR001623 -
Aev03g2203 184 PRINTS DnaJ domain signature 57 75 IPR001623 -
Aev03g2203 184 Gene3D DnaJ domain 44 147 IPR036869 -
Aev03g2203 184 CDD DnaJ 54 112 IPR001623 -
Aev03g2203 184 PANTHER CHAPERONE DNAJ DOMAIN PROTEIN 3 183 - -
Aev03g2203 184 SUPERFAMILY Chaperone J-domain 50 119 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g2203 Aev-Chr3 24126991 24127545 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g2203 56 121 C2H2 Transcription Factor Family AT1G74250 42.647 1.16e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g2203 - - gmx:100811478 201.83