Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2199 ATGGCAGCTACAACATCTAGTGCTGTGTTGAATGGATTAGGATCTTCCTTCTTATGTGGAGGAAAGAGGAGCCAAACCCTTCTGGCTTCTACTATTGGAGGCAGAGTTGGTGCTGCTATTAGTCCAACAAGACTCATTGTAGCAGCTGTTGCAGCTGCACCAAAGAAGTCATGGATCCCTGCTGTTAAAGGTGGTGGCAATCTCATCGACCCCGAATGGCTCGATGGCTCGCTTCCAGGTGACTTTGGTTTTGATCCATTAGGCCTAGGGAAGGACCCAGCATTCCTCAAATGGTACAGAGAAGCTGAGCTCATTCATGGAAGGTGGGCAATGGCAGCAGTTTTAGGCATCTTTGTAGGGCAAGCATGGAGTGGAGTTCCATGGTTTGAGGCTGGAGCTGACCCTAATGCTATTGCTCCTTTCTCATTTGGTTCTCTTCTTGGGACACAGTTGATTCTCATGGGTTGGGTTGAGAGCAAGAGATGGGTGGATTTCTTCAATCCAGATTCACAGTCAGTGGATTGGGCCACTCCATGGTCTAGAACTGCTGAGAACTTTGCCAATTACACTGGGGACCAAGGATACCCTGGGGGCAAATTCTTTGACCCTTTGGGACTTGCTGGAACACTCAAGGATGGAGTTTATATCCCTGATAGGGAGAAGCTAGAGAGATTGAAACTTGCTGAGATTAAGCATGCTAGGATTGCTATGTTGGCTATGTTGATTTTCTACTTTGAAGCTGGGCAAGGGAAGACACCACTTGGTGCCCTTGGCTTGTGA 780 0.4795 MAATTSSAVLNGLGSSFLCGGKRSQTLLASTIGGRVGAAISPTRLIVAAVAAAPKKSWIPAVKGGGNLIDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWSGVPWFEAGADPNAIAPFSFGSLLGTQLILMGWVESKRWVDFFNPDSQSVDWATPWSRTAENFANYTGDQGYPGGKFFDPLGLAGTLKDGVYIPDREKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2199 259 PANTHER CHLOROPHYLL A-B BINDING PROTEIN CP24 10A, CHLOROPLASTIC 3 259 - -
Aev03g2199 259 Pfam Chlorophyll A-B binding protein 71 247 IPR022796 -
Aev03g2199 259 Gene3D Chlorophyll a/b binding protein domain 71 258 - -
Aev03g2199 259 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 3 259 IPR001344 GO:0009765|GO:0016020
Aev03g2199 259 SUPERFAMILY Chlorophyll a-b binding protein 66 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g2199 Aev-Chr3 24105860 24106763 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g2199 1 259 Chloroplast and Mitochondria Gene Families AT1G15820 84.615 3.62e-157 435
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g2199 K08917 - gmx:100783223 485.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g2199 03 24105860 24106763 Aev04g0813 04 4977753 4978707 PCT