Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2186 ATGTCTCACTTCGGAAGATCAGGTCCCCCGGACATCTCCGACACCTACTCTCTCCTCGTCCTCAACATCACTTTCCGCACAACCGCCGATGACTTATTCCCTCTCTTTGACAAGTATGGTAAGGTCGTTGACATCTTCATCCCCAAAGATCGAAGGACTGGTGAGTCGAGGGGCTTCGCATTTGTGCGTTACAAGTATGCTGACGAGGCTCAGAAGGCCGTCGAAAGGCTCGATGGAAGAATGGTCGATGGGCGTGAAATAACTGTCCAGTTTGCTAAATATGGCCCCAATGCTGAGCGCATTCACAAAGGAAGGATTATTGAAACGCTCCCAAGGACAAGGTACAGATCAAGGAGCCGCAGTCCCAGGAGAAGGCATCGTGATGATTATAGAGACAGGGATTATCGGAGGAGAAGTCGCAGCAGGAGTTATGATAGGTATGAACGTGACAGATACCGTGGGAAAGATAGAGATTATCGCCGCCGCAGCAGGAGCCGCAGTGCCAGTCTTGACTACAATGATCGTGGAAGGGGGCACTATGATGATGAGCGTCGTAGTAGAAGCAGGAGTCGATCAGTGGATAGCCGCTCCCCTGCACGGGACAGTGCTAGTCCACGAAGGAGTCCTTCCCCCCAGAGGAGTGTATCTCCTCAAAGGAGTGTTTCCCCAAGGAAAAGTCCTCGAGGTGAAAGTCCTGAGAATCGGAGCAATGGACGATCTCCTTCACCTCACAGTCGAAGTGTCTCACCACGAGGTCGCCCTGATGCTTCAAGAAGCCCATCTCCTAGAAATTCTAATGGTGATGACTGA 810 0.516 MSHFGRSGPPDISDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFAFVRYKYADEAQKAVERLDGRMVDGREITVQFAKYGPNAERIHKGRIIETLPRTRYRSRSRSPRRRHRDDYRDRDYRRRSRSRSYDRYERDRYRGKDRDYRRRSRSRSASLDYNDRGRGHYDDERRSRSRSRSVDSRSPARDSASPRRSPSPQRSVSPQRSVSPRKSPRGESPENRSNGRSPSPHSRSVSPRGRPDASRSPSPRNSNGDD* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2186 269 PANTHER SERINE/ARGININE RICH SPLICING FACTOR 1 268 - -
Aev03g2186 269 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR SC35 1 268 - -
Aev03g2186 269 MobiDBLite consensus disorder prediction 105 269 - -
Aev03g2186 269 Gene3D - 4 103 IPR012677 -
Aev03g2186 269 MobiDBLite consensus disorder prediction 125 196 - -
Aev03g2186 269 MobiDBLite consensus disorder prediction 197 225 - -
Aev03g2186 269 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 16 94 IPR000504 GO:0003723
Aev03g2186 269 SMART rrm2_1 17 90 IPR003954 GO:0003676
Aev03g2186 269 MobiDBLite consensus disorder prediction 233 269 - -
Aev03g2186 269 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 18 88 IPR000504 GO:0003723
Aev03g2186 269 SUPERFAMILY RNA-binding domain, RBD 8 101 IPR035979 GO:0003676
Aev03g2186 269 SMART rrm1_1 17 90 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g2186 Aev-Chr3 24041850 24043812 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g2186 13 92 Eukaryotic Initiation Factors Gene Family AT3G11400 35.000 1.45e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g2186 K12891 - gmx:100778928 305.064