Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2171 ATGGCTTTCCATTCCCTAAATCAGTTATCTAATCCCACTGACTATTATGAAACTACTAATAATGAACTCAACTCCTCTTCATCATCAAGGCCAGTGCCACCACCCCAGCACCAAACTACTGTCCTAGAGATTGTTCACGATGAGCCCAACGCAGTACTTCAGATGGAATCAACACTATTTAGCGCTTCACCAATAATAAACAACACTAATAATTATAATAATGGAGCAGAATCTGCGGAAGTACCAATATGCTTGACATGGAAGGATCTGTGGGTTACAGCGTCTTCAATGGGAAGAAGGAAGGGAAGCAGATCGATACTTGAAGGCCTCACAGGGTATGCAAAGCCTGGGCAGCTCCTTGCCATTATGGGCCCTTCTGGTTCTGGCAAGTCCACTCTTCTTGATGCTCTGGCTGGCAGATTGGATTCTAACAAAACCCAAACAGGGGACATTCTCATCAATGGTCGCAAACAACCATTGGCTTACGGAACCTCGGCATATGTGACACAAGATGATACCTTAATAACAACGTTGACAGTGAGGGAAGCAGTGTACTACTCTGCTCAACTGCAATTGCCAGATTCCATGTCGAAAGCAGAGAAGAGAGAGAGGGCAGAGTTTACAATAAGAGAGATGGGACTGCAAGACGCCATGAACACGAGAATTGGAGGGTGGGGTGTTAAGGGCATCAGTGGGGGGCAGAAGAGGCGTGTCAGCATTTGCATCGAGATCCTCACACGCCCCAGACTTCTGTTCCTTGATGAACCAACGAGTGGGCTTGACAGCGCTGCATCCTATTATGTCATGAAAAGAATTGCAACCCTGGATCAAAAGGATGGTATTGAGAGGACTGTTATTGCCTCAATCCATCAACCAAGTAGTGAAGTCTTTCAATTTTTCCACAACCTTTGCCTTCTATCTTATGGGAAGACAGTCTACTTTGGACCTGCTTCTAGTGCAATAGAGTTTTTCACTTCAAATGGTTTCCCTTGTCCTACCCTACAAAACCCATCTGATCATCTATTGAAAACTATAAATAAGGACTTTGACCAGGAAACCGAGTTGGGTTTAACCGAGAATGGAACAGTATCCACAGAAGAAGCGATTCGGATTCTTATCAATTCATATGAATCATCTGAAATGAACCAAGAGGTTAAAAAGAAAGTAGAAGTGTTGAACATTAAAAAGAAAACAAGTTCAAGAGACAAGAAGAGAGGTCATGCTGGGTTCCTTACTCAGTGCACTGTTCTTACCAAAAGATCTCTAGTGAACATGCATCGTGATCTAGGCTATTATTGGCTACGCCTTGTCGTATATTTCGGGTTGGCTATATCTCTAGGCACCATCTACTATGATCTGGGCACAAGTTATCACTCATGTCAGGACAGAGGATCTCTTCTTATCTTTGTGACTACATTCGTAACTTTCATGAGCATTGGTGGATTCCCTTCCTTTGTGGAAGACATGAAGGTATTTGAACGAGAAAGGCTAAATGGGCATTACGGCGTGACAGCATTCGTAATAGGGAACACCTTTTCGGGCATCCCGTTCTTGTTCCTGATTGCTATGACTCCTGGAGCAACAGCCTATTACCTTTCTGGTCTTCAGAGAGGACATGACCATTTCATATTCTTCATCTGCACTCTGTTTGTCTGTGTGATGCTGGTTGAGAGCCTCATGATGGTAGTCTCAAGCATAGTCCCAAACTATCTTATGGGCATCATAACCGGCGCTTCAATCCAAGGCATCATGATTTTGGTTGCTGGCTACTTTAAATTGACCAATGACCTTCCCAACCCAATTTGGAGGTACCCATTGCACTATATGGCATTCCATTCTTTTGCAATGCAAGGATTGTTCAAGAACGAATTTCAAGGACTTCAATTCCCTACTAATAATAATAATATTACCCATAATAATCATGGGTATCACATTAATAATTACACTATTAGTGGCGAAGAGGTTCTGAGGAGCACGTTTCAAGTGGACATGAGGTACTCCAAGTGGTTTGATCTGGCAATCTTGGTGGGGATGGTTGTGGTGTACCGAGTTCTGTTTTTCGTTGTGATTAAGATTACAGAGATAGTGAAGCCCATTGTTGTGTCCTTCGTCTTAGTTTCTCCCAAGCACACAATGCAGGTCACGGAAAATCCCAATGCCACTCCTTATAATTTGCACCCACAGGATGCTGAATAA 2196 0.4326 MAFHSLNQLSNPTDYYETTNNELNSSSSSRPVPPPQHQTTVLEIVHDEPNAVLQMESTLFSASPIINNTNNYNNGAESAEVPICLTWKDLWVTASSMGRRKGSRSILEGLTGYAKPGQLLAIMGPSGSGKSTLLDALAGRLDSNKTQTGDILINGRKQPLAYGTSAYVTQDDTLITTLTVREAVYYSAQLQLPDSMSKAEKRERAEFTIREMGLQDAMNTRIGGWGVKGISGGQKRRVSICIEILTRPRLLFLDEPTSGLDSAASYYVMKRIATLDQKDGIERTVIASIHQPSSEVFQFFHNLCLLSYGKTVYFGPASSAIEFFTSNGFPCPTLQNPSDHLLKTINKDFDQETELGLTENGTVSTEEAIRILINSYESSEMNQEVKKKVEVLNIKKKTSSRDKKRGHAGFLTQCTVLTKRSLVNMHRDLGYYWLRLVVYFGLAISLGTIYYDLGTSYHSCQDRGSLLIFVTTFVTFMSIGGFPSFVEDMKVFERERLNGHYGVTAFVIGNTFSGIPFLFLIAMTPGATAYYLSGLQRGHDHFIFFICTLFVCVMLVESLMMVVSSIVPNYLMGIITGASIQGIMILVAGYFKLTNDLPNPIWRYPLHYMAFHSFAMQGLFKNEFQGLQFPTNNNNITHNNHGYHINNYTISGEEVLRSTFQVDMRYSKWFDLAILVGMVVVYRVLFFVVIKITEIVKPIVVSFVLVSPKHTMQVTENPNATPYNLHPQDAE* 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2171 731 Pfam ABC-2 type transporter 412 624 IPR013525 GO:0016020|GO:0140359
Aev03g2171 731 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 97 325 IPR027417 -
Aev03g2171 731 SMART AAA_5 116 305 IPR003593 -
Aev03g2171 731 MobiDBLite consensus disorder prediction 1 36 - -
Aev03g2171 731 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 85 333 IPR003439 GO:0005524
Aev03g2171 731 Gene3D - 84 420 IPR027417 -
Aev03g2171 731 ProSitePatterns ABC transporters family signature. 230 244 IPR017871 GO:0005524
Aev03g2171 731 MobiDBLite consensus disorder prediction 1 38 - -
Aev03g2171 731 Pfam ABC-2 type transporter 290 390 IPR043926 GO:0140359
Aev03g2171 731 Pfam ABC transporter 109 258 IPR003439 GO:0005524
Aev03g2171 731 PANTHER WHITE-BROWN-COMPLEX ABC TRANSPORTER FAMILY PROTEIN 74 723 - -
Aev03g2171 731 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 74 723 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g2171 Aev-Chr3 23941893 23947133 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g2171 106 318 Calmodulin-binding Proteins AT2G36910 29.817 2.72e-10 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g2171 K05681 - gmx:100794527 928.702