Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2157 ATGGGGCTGCATCAGATCCCAGAGGACTGTCAGGACTACTGCCAAAGCCAAGAGTCTTGTGTTTCCGAACCAAAATGCAAAGACTGCATCGATGATTGCTCAACGCTTCTGAAAGATTACCTTACACCACCATCAGACACAGATCATGGCAAGCACAGCAAAGCCCCCACCTATTTGATCATCACTTTTTCTGTTGTAGCCGCTGTTTTCTTTGCCCTCTGCTGCTACGCCATCTATGTCAAGTTTTTCTCCCCTAGGAACAGGGCAAGGAGGAGTTTACCACCATCATCACGCCAACAACACCAAGAAGATACCCGCGATGAGTTTCTTGATGAAGAACATGGCCCTCTTGTGGACCACCCCATCTGGTACATCCGTACACCCGGTCTCCACCCATCAATCATCAACGCAATCACGGTTTGCAAGTACAACAAAGGTGAGGGTTTGATTGAAGGAACAGAGTGCTCTGTTTGCTTGAGTGAGTTTCAAGAAGATGAGAGTCTCAGGCTGTTGCCCAAGTGTAACCACGCTTTCCACTTGCCTTGTATTGATACTTGGCTTGGATCACACACCAATTGTCCCATGTGTCGAGCTCCCATTGTTACCAACCCTGCTGCTACAACTACAAGGATTCCATCTATGGAGCCTAATGTTGTTGTTGTTGTTGGTTCTAGTTCCTTGGAAGGTATTAGTGAAAGTCATGGAATGGAAGAAAATAGTGGTGGTGGTGCTGAGTTGAGGAATGGAACAGAGGAAGACGTGCAAGAGGAAGTTGAAAGAGGTGGAAGAAGGGTGTGTGAGAATGAGGTACTTAATATGCAGCCAAGGAGATCAGTGTCTTTGGATTCTTCTTCTGCTGCTAAGATCAGTGCTGCTGCTCTTGCCACTGTTGGATCAGGATCAGTGCAAGAATCTCATGGGAATTCTATGAGAAAGATCACTGGGGAAGCCAATGAACTAGTTGGTTCAAGAAAGGGTCTTTTTGGTTCAAAAGGTAGTTCTTCTTCTTCTTCAAGGACAAGAAGGTACCTTCAGAGTGCGCCTGGTTCAATGAAGAGGTCACGGTCATTTAGTGGCAAACAACACCTGGTGTCATGCTATGGCAGAAGCAGAAGCCAGAAGAAGCCAAGTGCTGTCGTGAGAAGCTTTTGA 1152 0.4661 MGLHQIPEDCQDYCQSQESCVSEPKCKDCIDDCSTLLKDYLTPPSDTDHGKHSKAPTYLIITFSVVAAVFFALCCYAIYVKFFSPRNRARRSLPPSSRQQHQEDTRDEFLDEEHGPLVDHPIWYIRTPGLHPSIINAITVCKYNKGEGLIEGTECSVCLSEFQEDESLRLLPKCNHAFHLPCIDTWLGSHTNCPMCRAPIVTNPAATTTRIPSMEPNVVVVVGSSSLEGISESHGMEENSGGGAELRNGTEEDVQEEVERGGRRVCENEVLNMQPRRSVSLDSSSAAKISAAALATVGSGSVQESHGNSMRKITGEANELVGSRKGLFGSKGSSSSSSRTRRYLQSAPGSMKRSRSFSGKQHLVSCYGRSRSQKKPSAVVRSF* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2157 383 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 8 366 IPR044675 -
Aev03g2157 383 SUPERFAMILY RING/U-box 148 203 - -
Aev03g2157 383 Pfam Ring finger domain 154 197 IPR001841 -
Aev03g2157 383 MobiDBLite consensus disorder prediction 328 362 - -
Aev03g2157 383 PANTHER RING-H2 FINGER PROTEIN ATL54 8 366 - -
Aev03g2157 383 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 131 204 IPR013083 -
Aev03g2157 383 MobiDBLite consensus disorder prediction 89 111 - -
Aev03g2157 383 CDD RING-H2_EL5_like 154 197 - -
Aev03g2157 383 MobiDBLite consensus disorder prediction 324 362 - -
Aev03g2157 383 SMART ring_2 155 196 IPR001841 -
Aev03g2157 383 ProSiteProfiles Zinc finger RING-type profile. 155 197 IPR001841 -
Aev03g2157 383 MobiDBLite consensus disorder prediction 231 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g2157 Aev-Chr3 23844439 23845590 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g2157 55 256 C3H Transcription Factor Family AT1G72220 46.305 1.62e-48 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g2157 - - aip:107631077 312.768