Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2130 ATGGATAAGCTGAATCCGCAGCAGCAGGAGGTGGTGGTAGTTCCCATGCAGGCGGTGCATTCTTCAGGCTCTGATGATGAAGAAGAAGAAGTAGCTCCACCGAGTTCTAGCTATGGTGGCAATGCTTGTGCTACCCGAACCAGTGAACTCACCATTTCCTTTGAAGGCGAGGTCTATGTTTTCCCCGCGGTTACACCACAAAAGGTGCAGGCTGTATTGTTACTACTGGGAGGGCAGGGGATGCCCAATAGTGTCCCCAGCGTGGGCTATTTGTTGCAGCAGAACTGTCAGGACATTGAGGGAATAAAAGATACTTCCCAAAGTTCAAAGCTTTCACGGAGAATTGAATCACTTGTTAGGTTTCGTGAAAAACGAAAAGAGAGATGTTTCGATAAGAAAATCCGGTACACTTGCCGTAAGGAGGTTGCCCAGAGGATGCATCGTAAGAATGGGCAGTTTGCTTCAGTTAAGGAAAACAACAAGCCTCCTGGTGAAAAGTGGGATTTAAGCAACGGTACTTGTAGCCCAGAATCTATTGAACGTAGATGCCAGCATTGTGGAATCCACGAGAAGTCTACTCCAGTTATGCGTCGAGGACCAGGTGGTCCAAGATCTCTGTGCAATGCCTGTGGGCTTATGTGGGCAAATAAGGGTACCCTTAGAGATCTCAGCAAATCAGGCAGGATTACTTTCGATCAAAATGAACTGGATACTTCAGCTGATATAAAGCCTTCACCAACCGTACCTGGGAATTCTGGTACTGACCAGAACAAGGAGAGCAGCCCTGAGGAAATTAAGCCCGTGGCAATAGGCTACAGACAGTCACCTGAAAGGACAAATGAGCAGTATATTCTTGAAACTGCTGAAGCAGTCACCAATGGCATGTCCTTCCAAGTGGATAATCACGCACTTAGTCTTCACGAGCAGGATACTCTTGCTGATGCTTCTAGGACAGAATTTGAGATTCCTGCATGTTTTGATGATCAGGTTGATATTGATGATTCCAACTTGAGGACTTACTGGCTGTGA 1029 0.4665 MDKLNPQQQEVVVVPMQAVHSSGSDDEEEEVAPPSSSYGGNACATRTSELTISFEGEVYVFPAVTPQKVQAVLLLLGGQGMPNSVPSVGYLLQQNCQDIEGIKDTSQSSKLSRRIESLVRFREKRKERCFDKKIRYTCRKEVAQRMHRKNGQFASVKENNKPPGEKWDLSNGTCSPESIERRCQHCGIHEKSTPVMRRGPGGPRSLCNACGLMWANKGTLRDLSKSGRITFDQNELDTSADIKPSPTVPGNSGTDQNKESSPEEIKPVAIGYRQSPERTNEQYILETAEAVTNGMSFQVDNHALSLHEQDTLADASRTEFEIPACFDDQVDIDDSNLRTYWL* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2130 342 MobiDBLite consensus disorder prediction 234 258 - -
Aev03g2130 342 ProSitePatterns GATA-type zinc finger domain. 183 210 IPR000679 GO:0006355|GO:0043565
Aev03g2130 342 MobiDBLite consensus disorder prediction 234 273 - -
Aev03g2130 342 Pfam CCT motif 114 156 IPR010402 GO:0005515
Aev03g2130 342 PANTHER GATA TRANSCRIPTION FACTOR 28 12 333 IPR045280 GO:0006355
Aev03g2130 342 SMART tify_2 43 78 IPR010399 -
Aev03g2130 342 MobiDBLite consensus disorder prediction 1 15 - -
Aev03g2130 342 MobiDBLite consensus disorder prediction 1 42 - -
Aev03g2130 342 ProSiteProfiles CCT domain profile. 114 156 IPR010402 GO:0005515
Aev03g2130 342 CDD ZnF_GATA 182 225 IPR000679 GO:0006355|GO:0043565
Aev03g2130 342 Pfam GATA zinc finger 183 219 IPR000679 GO:0006355|GO:0043565
Aev03g2130 342 Gene3D - 176 235 IPR013088 GO:0006355|GO:0008270
Aev03g2130 342 ProSiteProfiles Tify domain profile. 43 78 IPR010399 -
Aev03g2130 342 PANTHER GATA TRANSCRIPTION FACTOR 28 ISOFORM X1 12 333 - -
Aev03g2130 342 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 179 231 - -
Aev03g2130 342 Pfam tify domain 47 77 IPR010399 -
Aev03g2130 342 SMART GATA_3 177 230 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g2130 Aev-Chr3 23734993 23738306 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g2130 49 226 Tify Gene Family AT1G51600 57.754 1.81e-64 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Aev03g2130 CCT 2e-14 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g2130 - - gmx:100785549 464.536