Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2082 ATGAGCATGATTCCCTTGACTTTGATAGTAGGGATTAGCATAGGCTTTGTGGTTGGAGTGGGTTTGGCATTTTCAGTTTTGTTCTGCTTCAGGCGTGGAGGAATAATCAGAAGAAGGAATCATCATACACTGGTGGTGGAGAAGAGCACTTCTCAGAGATCAGCAACCACTGCTCCTATCCGATTCAAAGGGGTTGATTCCAGCACAACTTTATCAGACTCCAATGATTCACCCAGAACATCTGAGTGGAGTAACATGCCTTTATGGTTGGAAGGACTCAGGAGGAAGAATGTAGTTTCTGCTTGTGGGATTCCCAAGTATTCTTACAAAGACATACAAAAGGCAACTTCTAATTTCACAACAATCATAGGCCATGGAGCATTTGGTCCTGTTTACAAAGCACAGATGTCCACAGGTGAGACAGTTGCTGTTAAAGTTCTTGGTACAGATTCAAGTCAAGGAGAAAAGGAATTCTTAACTGAGGTCCTCTTACTTGGAAGGTTACATCACAAAAATCTTGTGGGTTTGGTGGGATATGCTGCAGAAAGAGGACAGCATATGCTCCTTTACATTTATATGAGCAATGGCAATCTTGCTTCTCATTTGTATGGCCAGAATCATGAGCCGTTGGACTGGGATGTAAGACTTAGGATAGCACTTGATGTTGCAAGGGGACTTGAATATCTACATTATGGGGCTGCTCCACCTGTTGTGCACCGTGACATCAAATCTTCCAACATCCTATTGGACCAGTCTATGAGAGCTAAGGTCACAGATTTTGGGCTTTCCAGACCAGAGATGATCAAACCTCATGCATCAAATGTCAGAGGAACTTTTGGATATCTTGATCCTGAGTATATGTCTACAAGAACCTTCACTAAGAAAAGTGACGTTTATAGTTTTGGTGTGCTATTGTTTGAGCTCATTACTGGCAGGAATCCACAGCAGGGCCTCATGGACTATGTAAAATTAGCAGCAATGGAAGGAGAGGGTAAGGTTGGATGGGAAGAAATTGTGGATTCACAACTGAATGGGAAATATGATGTGCATAGGCTTAATGATTTGGCTTCGCTTGCATTCAAATGTGTCAATGAAGTCTCTGAAAGCCGACCGCCGATGAGCAACATTGTTCAAACATTATCTCACCTTTGTAAGAACCATGGTAAAAACCACTGCAGCACATCTCCTGCTGCAGCATTGAAGGAAGTTTCCATTGAAATGGCACACCTAGAAACCCAGGAATTTTCATCAACAATTGAATGTCCAAAGGTGCTGTGCAGATTGCATAGTCGATAA 1296 0.4252 MSMIPLTLIVGISIGFVVGVGLAFSVLFCFRRGGIIRRRNHHTLVVEKSTSQRSATTAPIRFKGVDSSTTLSDSNDSPRTSEWSNMPLWLEGLRRKNVVSACGIPKYSYKDIQKATSNFTTIIGHGAFGPVYKAQMSTGETVAVKVLGTDSSQGEKEFLTEVLLLGRLHHKNLVGLVGYAAERGQHMLLYIYMSNGNLASHLYGQNHEPLDWDVRLRIALDVARGLEYLHYGAAPPVVHRDIKSSNILLDQSMRAKVTDFGLSRPEMIKPHASNVRGTFGYLDPEYMSTRTFTKKSDVYSFGVLLFELITGRNPQQGLMDYVKLAAMEGEGKVGWEEIVDSQLNGKYDVHRLNDLASLAFKCVNEVSESRPPMSNIVQTLSHLCKNHGKNHCSTSPAAALKEVSIEMAHLETQEFSSTIECPKVLCRLHSR* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2082 431 Gene3D Transferase(Phosphotransferase) domain 1 193 404 - -
Aev03g2082 431 Gene3D Phosphorylase Kinase; domain 1 80 192 - -
Aev03g2082 431 ProSitePatterns Serine/Threonine protein kinases active-site signature. 237 249 IPR008271 GO:0004672|GO:0006468
Aev03g2082 431 SUPERFAMILY Protein kinase-like (PK-like) 98 380 IPR011009 -
Aev03g2082 431 SMART serkin_6 117 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev03g2082 431 PANTHER OS01G0253100 PROTEIN 3 415 IPR045271 GO:0004714|GO:0006468
Aev03g2082 431 ProSiteProfiles Protein kinase domain profile. 117 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev03g2082 431 Pfam Protein tyrosine and serine/threonine kinase 119 380 IPR001245 GO:0004672|GO:0006468
Aev03g2082 431 CDD STKc_IRAK 123 380 - -
Aev03g2082 431 PANTHER DUAL-SPECIFICITY KINASE DOMAIN PROTEIN 3 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g2082 Aev-Chr3 23481148 23483551 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g2082 107 386 Receptor kinase-like Gene Family AT1G79620 45.675 4.16e-74 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Aev03g2082 PK_Tyr_Ser-Thr 7.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g2082 - - gmx:100816549 607.06